Sequence 1: | NP_524340.2 | Gene: | sim / 41612 | FlyBaseID: | FBgn0004666 | Length: | 688 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001100578.1 | Gene: | Sim2 / 304071 | RGDID: | 1308016 | Length: | 656 | Species: | Rattus norvegicus |
Alignment Length: | 544 | Identity: | 280/544 - (51%) |
---|---|---|---|
Similarity: | 333/544 - (61%) | Gaps: | 94/544 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 25 MKEKSKNAARTRREKENTEFCELAKLLPLPAAITSQLDKASVIRLTTSYLKMRQVFPDGLGEAWG 89
Fly 90 S-SPAMQRGATIKELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELTGNSIFEYIHN 153
Fly 154 YDQDEMNAILSLHPHINQHPLAQTHTPIGSPNGVQHPSAYDHDRGSHTIEIEKTFFLRMKCVLAK 218
Fly 219 RNAGLTTSGFKVIHCSGYLKARIYPDRGDGQGSLIQNLGLVAVGHSLPSSAITEIKLHQNMFMFR 283
Fly 284 AKLDMKLIFFDARVSQLTGYEPQDLIEKTLYQYIHAADIMAMRCSHQILLYKGQVTTKYYRFLTK 348
Fly 349 GGGWVWVQSYATLVHNSRSSREVFIVSVNYVLSEREVKDLVLNEIQTGVVK-----REPISPAAQ 408
Fly 409 AAQAAQ--------------------AAQAAQAAQAAQAAHVAQAVQAQVVVVPQQSV------- 446
Fly 447 -------------------------VVQPQCAGATGQPVGPGTPVSLA------LSASPKLDPYF 480
Fly 481 EPELPLQPAVTPVPPTNNSSSSSN 504 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sim | NP_524340.2 | HLH | 26..78 | CDD:238036 | 46/51 (90%) |
PAS | 102..215 | CDD:279347 | 67/112 (60%) | ||
PAS | 102..163 | CDD:214512 | 53/60 (88%) | ||
PAS | 278..376 | CDD:238075 | 70/97 (72%) | ||
PAS_3 | 291..377 | CDD:285623 | 60/85 (71%) | ||
Sim2 | NP_001100578.1 | HLH | 2..52 | CDD:238036 | 44/49 (90%) |
PAS | 79..>141 | CDD:279347 | 53/61 (87%) | ||
PAS | 79..140 | CDD:214512 | 53/60 (88%) | ||
PAS | 230..328 | CDD:238075 | 70/97 (72%) | ||
PAS_3 | 243..329 | CDD:285623 | 60/85 (71%) | ||
SIM_C | 359..649 | CDD:284122 | 25/161 (16%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 139 | 1.000 | Domainoid score | I4663 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 476 | 1.000 | Inparanoid score | I1427 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000232 | |
OrthoInspector | 1 | 1.000 | - | - | otm46444 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_106200 | |
Panther | 1 | 1.100 | - | - | O | PTHR23043 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X501 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
10 | 9.960 |