Sequence 1: | NP_524340.2 | Gene: | sim / 41612 | FlyBaseID: | FBgn0004666 | Length: | 688 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_036913.3 | Gene: | Arnt2 / 25243 | RGDID: | 2154 | Length: | 712 | Species: | Rattus norvegicus |
Alignment Length: | 713 | Identity: | 159/713 - (22%) |
---|---|---|---|
Similarity: | 268/713 - (37%) | Gaps: | 167/713 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 KEKSKNAARTRREKENTEFCELAKLLPLPAAITSQLDKASVIRLTTSYLK-MRQVFPDGLGEAWG 89
Fly 90 SSPAMQRGATIKELGSHLLQTLDGFIFVVAPD-GKIMYISETASVHLGLSQVELTGNSIFEYIHN 153
Fly 154 YDQDEMNAILSLHPHINQHPLAQTHTPIGSPNGVQHPSAYDHDRGSHTIEIEKTFFLRMKC---- 214
Fly 215 ----------VLAKR---NAGLTTSG---FKVIHCSGYLKARIYP---------DRGDGQGSLIQ 254
Fly 255 NLGLVAVGH-SLPSSAI----------TEIKLHQNMFMFRAKLDMKLIFFDARVSQLTGYEPQDL 308
Fly 309 IEKTLYQYIHAADIMAMRCS-HQILLYKGQVTTKYYRFLTKGGGWVWVQSYATLVHNSRSSREVF 372
Fly 373 IVSVNYVLSEREVKDLVLNEIQTGVVKREPISPAAQAAQAAQAAQAAQAAQAAQAAHVAQAVQAQ 437
Fly 438 ----------VVVVPQQSVVVQPQCAGATGQPVGPGTPVSLALSASPKLDPYFEPELPLQPAVTP 492
Fly 493 VPPTNNSSSSSNNNNGVWHHHHVQQQQQSGSMDHDSLSYTQLYPPLNDLVVSSSSSVGGGTASSA 557
Fly 558 GGGSSASASSSGVYSTEMQYPDTTTGNLYYNNNNHYYYDYDATVDVATSMIRPFSANSNSCSSSS 622
Fly 623 ESERQLSTGNA--SIVNET----------SPSQTTYSDLSHNFELSYFSDNSSQQHQHQQQQQ 673 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sim | NP_524340.2 | HLH | 26..78 | CDD:238036 | 15/52 (29%) |
PAS | 102..215 | CDD:279347 | 31/127 (24%) | ||
PAS | 102..163 | CDD:214512 | 20/61 (33%) | ||
PAS | 278..376 | CDD:238075 | 30/98 (31%) | ||
PAS_3 | 291..377 | CDD:285623 | 27/86 (31%) | ||
Arnt2 | NP_036913.3 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..20 | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 35..74 | 1/8 (13%) | |||
bHLH-PAS_ARNT | 62..124 | CDD:381517 | 18/63 (29%) | ||
PAS | 137..243 | CDD:395786 | 30/112 (27%) | ||
PAS_11 | 336..436 | CDD:405306 | 32/111 (29%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 573..712 | 28/156 (18%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG47781 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |