DRSC - DRSC Integrative Ortholog Prediction Tool

DRSC/TRiP Functional Genomics Resources

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Protein Alignment pic and Sf3b3

DIOPT Version :10

Sequence 1:	NP_650257.1	Gene:	pic / 41611	FlyBaseID:	FBgn0260962	Length:	1140	Species:	Drosophila melanogaster
Sequence 2:	NP_728546.1	Gene:	Sf3b3 / 38093	FlyBaseID:	FBgn0035162	Length:	1227	Species:	Drosophila melanogaster

Alignment Length:	17	Identity:	8/17 - (47%)
Similarity:	11/17 - (64%)	Gaps:	0/17 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly   413 LMPKATVQCALAPSLIF 429
            :|.|||.|.|.|.:.:|
  Fly     1 MMMKATRQQAKAVTSVF 17

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
pic	NP_650257.1	MMS1_N	75..542	CDD:463091	8/17 (47%)
pic	NP_650257.1	CPSF_A	790..1100	CDD:427182
Sf3b3	NP_728546.1	MMS1_N	76..592	CDD:463091
Sf3b3	NP_728546.1	CPSF_A	872..1194	CDD:427182
Blue background indicates that the domain is not in the aligned region.

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