DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7966 and selenbp1

DIOPT Version :9

Sequence 1:NP_650256.2 Gene:CG7966 / 41610 FlyBaseID:FBgn0038115 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001016750.1 Gene:selenbp1 / 549504 XenbaseID:XB-GENE-959074 Length:472 Species:Xenopus tropicalis


Alignment Length:476 Identity:258/476 - (54%)
Similarity:330/476 - (69%) Gaps:13/476 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 GPGYATPLDAMRSGPREKLLYTVTVQPNLDEPHGDYLSTVDVDPESPTYCQIVHRTFTNRKGDEL 73
            ||||.||||||: ||||::||...:..|......|||:||||:|:||.|.|::||.......|||
 Frog     8 GPGYKTPLDAMK-GPREEILYLPCIYRNTGINKPDYLATVDVNPKSPKYSQVIHRLPMPNTNDEL 71

  Fly    74 HHSGWNACSSCYYVDESSKTVPKRDRLVLPSLNSDFIYILDVVTDPRKPEIVKTIDG-DVLKSHN 137
            ||||||.|||||  .::||.   |::|:||.|.|..||::||.||||.|.|.||::. :|.....
 Frog    72 HHSGWNTCSSCY--GDASKV---RNKLILPCLISSRIYVVDVGTDPRAPRIHKTVEPYEVFWKCG 131

  Fly   138 VTAPHTTHCLANGNIMISVMGDAEGYAKGDFILFDSD-FNCIGTWTKGDKKALCGYDFWYQPYFD 201
            :...||:|||..|.||||.:||..|..||.|:|.|.: |...|.|....:.|..||||||||..:
 Frog   132 LANLHTSHCLGCGEIMISSIGDPYGNGKGGFVLLDGETFEVKGNWEAEGEAAPFGYDFWYQPRHN 196

  Fly   202 VMVSSEWGAPNKWRRGWKNVDLEDMSQYGCRLNFYKWSTQTLYQTIDLGSDGITPLEIRFLHNPK 266
            ||:|:|||||..:..|:|..::: ...||..||.:.|:.....||||||.||:.||||||||:|.
 Frog   197 VMISTEWGAPKAFALGFKMEEVQ-AGMYGHSLNVWDWTEHRRIQTIDLGEDGLIPLEIRFLHDPD 260

  Fly   267 KAEGFVGCALNAKVFHFKKKSDSDEFEAKKVIDIPGKLVDTGSGVAEDMGGMISDIIISLDDRFL 331
            .|:|.|||||::.||.|.|:.|. ::.|:|||.:|.|.|: |..:.| |.|:|:||:||||||||
 Frog   261 AAQGLVGCALSSTVFRFYKEKDG-KWAAEKVIKVPSKKVE-GWALPE-MPGLITDILISLDDRFL 322

  Fly   332 YVNCWRHGDVRQYDITDPENPKLTGQLFLGGAICSDLPNVIVKEDKELKERPPARYVKGRRLEGG 396
            |.:.|.|||:||||||||.||||.||:||||:|....| |.|.|||:|:.:|....|||:::.||
 Frog   323 YFSNWLHGDIRQYDITDPRNPKLVGQIFLGGSILRGGP-VTVLEDKDLECQPDPVIVKGKKVPGG 386

  Fly   397 PQMLQLSLDGKRLYVSSSLYSPWDKQFYPKMVSQGGHIVLIDVDTVNGGISLNEDFLVDFANEPY 461
            |||:|||||||||||::||||.|||||||.|:.:|..::.|||||..||:.||.:|||||..||.
 Frog   387 PQMIQLSLDGKRLYVTNSLYSKWDKQFYPDMIKEGSVMLQIDVDTEKGGLKLNPNFLVDFGKEPG 451

  Fly   462 GPSLPHEMRYPGGDCTSDIWL 482
            ||.|.||:|||||||:||||:
 Frog   452 GPVLAHELRYPGGDCSSDIWV 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7966NP_650256.2 SBP56 6..482 CDD:283374 257/474 (54%)
LVIVD repeat 321..358 CDD:293789 28/36 (78%)
selenbp1NP_001016750.1 SBP56 7..472 CDD:377548 257/474 (54%)
LVIVD repeat 315..350 CDD:293789 27/34 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 500 1.000 Domainoid score I350
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2930
Inparanoid 1 1.050 500 1.000 Inparanoid score I1333
OMA 1 1.010 - - QHG61143
OrthoDB 1 1.010 - - D227621at33208
OrthoFinder 1 1.000 - - FOG0003227
OrthoInspector 1 1.000 - - oto102431
Panther 1 1.100 - - LDO PTHR23300
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5418
SonicParanoid 1 1.000 - - X2649
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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