Protein Alignment CG7966 and semo-1

DIOPT Version :10

• Sequence 1: NP_650256.2
• Gene: CG7966 / 41610
• FlyBaseID: FBgn0038115
• Length: 486
• Species: Drosophila melanogaster
• Sequence 2: NP_001255777.1
• Gene: semo-1 / 178360
• WormBaseID: WBGene00012538
• Length: 471
• Species: Caenorhabditis elegans
• Alignment Length: 482
• Identity: 236/482 - (48%)
• Similarity: 316/482 - (65%)
• Gaps: 24/482 - (4%)

  Fly     6 CCRGPGYATPLDAMRSGPREKLLYTVTVQPNLDEPHGDYLSTVDVDPESPTYCQIVHRTFTNRKG 70
            |..|||||:|.||:: ||||::|: ||.....|.|  |.:.||||:|||.|:||::.|......|
 Worm     9 CHGGPGYASPADAIK-GPREEVLF-VTAPNAADGP--DAIFTVDVNPESDTFCQVISRVDVPHIG 69

  Fly    71 DELHHSGWNACSSCYYVDESSKTVPKRDRLVLPSLNSDFIYILDVVTDPRKPEIVKTIDGDVLKS 135
            ||:||:||||||||:     .|...||..|::|.||||.|||::|..: ||..:..||:...|.|
 Worm    70 DEVHHTGWNACSSCH-----DKPTEKRSHLIVPCLNSDRIYIINVENE-RKIYLEHTIEPSKLHS 128

  Fly   136 HNVTAPHTTHCLANGNIMISVMGDAEGYAKGDFILFD-SDFNCIGTWTKGDKKALCGYDFWYQPY 199
            .|::.|||:||||:||||||.:|:|.|...|:|:|.| ..|...|||...:|.....|||||||.
 Worm   129 LNLSFPHTSHCLADGNIMISTLGEANGTPSGNFLLLDGKTFEPKGTWPADEKTVPFNYDFWYQPR 193

  Fly   200 FDVMVSSEWGAPNKWRRGWKNVDLEDMSQYGCRLNFYKWSTQTLYQTIDLGSD-GITPLEIRFLH 263
            .:||:|:|||:||..::|:....:.: ..||..::.::|.::...|||||... |..|||:||||
 Worm   194 RNVMISTEWGSPNHIKKGFNPAHVGE-GLYGNSVHIFEWDSKKYLQTIDLPQPLGALPLEVRFLH 257

  Fly   264 NPKKAEGFVGCALNAKVFHFKK-KSDSDEFEAKKVIDIPGKLVDTGSGVA-EDMGGMISDIIISL 326
            .|.....||||||.:.:|.... :.:|....|..|..||.|.|   ||.| .:|..:|:||:||:
 Worm   258 EPTSEHAFVGCALGSGIFRIHPVEENSTTHAATLVAFIPSKKV---SGWALPEMPALITDILISM 319

  Fly   327 DDRFLYVNCWRHGDVRQYDITDPENPKLTGQLFLGGAICSDLPNVIVKEDKELKERP-PARYVKG 390
            |||||||:||.|||:|||||:||...||..|:::||::.:: .||.|.|.    |:| .|.||||
 Worm   320 DDRFLYVSCWLHGDIRQYDISDPLKVKLNSQVYIGGSVHTE-SNVKVLEG----EKPIEALYVKG 379

  Fly   391 RRLEGGPQMLQLSLDGKRLYVSSSLYSPWDKQFYPKMVSQGGHIVLIDVDTVNGGISLNEDFLVD 455
            |::||||||||||||||||||::|||..||.||||:.|..|..:|.:::|..:|.:.:|.|||:|
 Worm   380 RKIEGGPQMLQLSLDGKRLYVTTSLYKKWDDQFYPEHVKSGATMVQVNIDPESGKMEINRDFLID 444

  Fly   456 FANEPYGPSLPHEMRYPGGDCTSDIWL 482
            |.....||.|.|||||||||||||||:
 Worm   445 FGKIEGGPYLAHEMRYPGGDCTSDIWI 471

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG7966	NP_650256.2	SBP56	6..482	CDD:461716	235/480 (49%)
		LVIVD repeat	321..358	CDD:293789	25/36 (69%)
semo-1	NP_001255777.1	SBP56	9..471	CDD:461716	235/480 (49%)