DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsc70-2 and SSB2

DIOPT Version :9

Sequence 1:NP_524339.1 Gene:Hsc70-2 / 41609 FlyBaseID:FBgn0001217 Length:633 Species:Drosophila melanogaster
Sequence 2:NP_014190.1 Gene:SSB2 / 855512 SGDID:S000005153 Length:613 Species:Saccharomyces cerevisiae


Alignment Length:609 Identity:354/609 - (58%)
Similarity:450/609 - (73%) Gaps:12/609 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 AIGIDLGTTYSCVGVWQNSKVEIIANDQGNRTTPSYVAFNETERLIGDPAKNQVAMNAKNTVFDA 70
            |||||||||||||..:::| ||||||:||||.|||:|||...||||||.||||.|:|.:||||||
Yeast     9 AIGIDLGTTYSCVATYESS-VEIIANEQGNRVTPSFVAFTPQERLIGDAAKNQAALNPRNTVFDA 72

  Fly    71 KRLIGRKFDDKKIQEDLKLWPFKVINEKGKPKIEVEFKGERKRFAPEEISSMVLTKMREIAEVYL 135
            ||||||:|||:.:|:|:|.||||||:..|.|.|||::..|.|.|:|:|||:||||||:||||..:
Yeast    73 KRLIGRRFDDESVQKDMKTWPFKVIDVDGNPVIEVQYLEETKTFSPQEISAMVLTKMKEIAEAKI 137

  Fly   136 GGKVKDAVVTVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGL--DKNLKGERNVLIF 198
            |.||:.||:||||||||:|||||||||:|:|||||||||||||||:||||  .|:.| ||:||||
Yeast   138 GKKVEKAVITVPAYFNDAQRQATKDAGAISGLNVLRIINEPTAAAIAYGLGAGKSEK-ERHVLIF 201

  Fly   199 DLGGGTFDVSVLSIDEGSLFEVKATAGDTHLGGEDFDNRLVNHFAEEFKRKHKSDIKGNARALRR 263
            ||||||||||:|.| .|.::.||:|:|:|||||:|||..|:.||..|||:|...||..:||||||
Yeast   202 DLGGGTFDVSLLHI-AGGVYTVKSTSGNTHLGGQDFDTNLLEHFKAEFKKKTGLDISDDARALRR 265

  Fly   264 LRTACERAKRTLSSSTEASLEIDALHEGIDFYSKISRARFEELNMDLFRSTMQPVERALSDAKMD 328
            ||||.|||||||||.|:.::|:|:|.:|.||.|.::|||||:||..||:||::|||:.|.|||:.
Yeast   266 LRTAAERAKRTLSSVTQTTVEVDSLFDGEDFESSLTRARFEDLNAALFKSTLEPVEQVLKDAKIS 330

  Fly   329 KKAIHDVVLVGGSTRIPKIQKLLQDLFGGKQLNLSINPDEAVAYGAAVQAAILTGVGSS-QIQDL 392
            |..|.:||||||||||||:||||.|.|.||||..|||||||||||||||.|||||..:| :.:||
Yeast   331 KSQIDEVVLVGGSTRIPKVQKLLSDFFDGKQLEKSINPDEAVAYGAAVQGAILTGQSTSDETKDL 395

  Fly   393 LLVDVAPLSLGIETAGGVMTNLVERNARIPCKQQQIFTTYSDNQNAVTIQVYEGERAMTKDNNLL 457
            ||:||||||||:...|.:...:|.||..:|..:::.|||.||||..|...||:|||...|:|.||
Yeast   396 LLLDVAPLSLGVGMQGDIFGIVVPRNTTVPTIKRRTFTTVSDNQTTVQFPVYQGERVNCKENTLL 460

  Fly   458 GTFNLTGIPPAPRGVPQIEVAFDLNADGILNVNAKDNSTGKSEKITISNDKGRLSKAEIDRMLSE 522
            |.|:|..||..|.|.|.:|..|:::|:|||.|.|.:.|||||..|||||..||||..||::|:::
Yeast   461 GEFDLKNIPMMPAGEPVLEAIFEVDANGILKVTAVEKSTGKSSNITISNAVGRLSSEEIEKMVNQ 525

  Fly   523 AEKYKVEDDRQRERVQSKNNLEAYIYACRQAV-DDAPSGVLSETERSKVRDKCSS--EASWLDKN 584
            ||::|..|:...::.:::..||:|:.:..|.| |...|..|....:||:....|.  .|..::..
Yeast   526 AEEFKAADEAFAKKHEARQRLESYVASIEQTVTDPVLSSKLKRGSKSKIEAALSDALAALQIEDP 590

  Fly   585 SLAEKEEFESHLKECQRICTPIMS 608
            |..|..:.|..||   |:.|..||
Yeast   591 SADELRKAEVGLK---RVVTKAMS 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-2NP_524339.1 PTZ00009 1..632 CDD:240227 354/609 (58%)
HSPA1-2_6-8-like_NBD 6..382 CDD:212675 258/377 (68%)
SSB2NP_014190.1 PTZ00009 6..575 CDD:240227 343/568 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341904
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100083
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.640

Return to query results.
Submit another query.