DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-2 and SSQ1

DIOPT Version :9

Sequence 1:NP_524339.1 Gene:Hsc70-2 / 41609 FlyBaseID:FBgn0001217 Length:633 Species:Drosophila melanogaster
Sequence 2:NP_013473.1 Gene:SSQ1 / 851084 SGDID:S000004361 Length:657 Species:Saccharomyces cerevisiae


Alignment Length:645 Identity:263/645 - (40%)
Similarity:400/645 - (62%) Gaps:69/645 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IGIDLGTTYSCVGVWQNS----KVEIIANDQGNRTTPSYVAF---------NETERLIGDPAKNQ 58
            ||||||||.|.|...::|    ...||.||:|.|||||.|||         ::.:.|:|..||.|
Yeast    31 IGIDLGTTNSAVAYIRDSNDKKSATIIENDEGQRTTPSIVAFDVKSSPQNKDQMKTLVGMAAKRQ 95

  Fly    59 VAMNAKNTVFDAKRLIGRKFDDKKIQEDLKLWPFKVINEKGKPKIEVEFKGERKRF-------AP 116
            .|:|::||.|..||||||.|:||::|.|:.:.|:|:        ::.|..|:....       :|
Yeast    96 NAINSENTFFATKRLIGRAFNDKEVQRDMAVMPYKI--------VKCESNGQAYLSTSNGLIQSP 152

  Fly   117 EEISSMVLTKMREIAEVYLGGKVKDAVVTVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAAL 181
            .:|:|::|..:::.:|.|||.||..||:||||||||||||||||||.:|||||||:|||||||||
Yeast   153 SQIASILLKYLKQTSEEYLGEKVNLAVITVPAYFNDSQRQATKDAGKLAGLNVLRVINEPTAAAL 217

  Fly   182 AYGLDKNLKGERN---VLIFDLGGGTFDVSVLSIDEGSLFEVKATAGDTHLGGEDFDNRLVNHFA 243
            ::|:|    .:||   :.::||||||||:|:|.|::| :|||:||.||||||||||||.:||:..
Yeast   218 SFGID----DKRNNGLIAVYDLGGGTFDISILDIEDG-VFEVRATNGDTHLGGEDFDNVIVNYII 277

  Fly   244 EEFKRKH----KSDIKGNARALRRLRTACERAKRTLSSSTEASLEIDALHEGIDFYSKISRARFE 304
            :.|..::    :.:|..|...::||:...||||..||...:..:|:..:::.......::....:
Yeast   278 DTFIHENPEITREEITKNRETMQRLKDVSERAKIDLSHVKKTFIELPFVYKSKHLRVPMTEEELD 342

  Fly   305 ELNMDLFRSTMQPVERALSDAKMDKKAIHDVVLVGGSTRIPKIQKLLQDLFGGKQLNLSINPDEA 369
            .:.:.|...|:.||::||.||.::.:.|.:|:||||.||:|||:.:::||| ||..|.|:||||.
Yeast   343 NMTLSLINRTIPPVKQALKDADIEPEDIDEVILVGGMTRMPKIRSVVKDLF-GKSPNSSVNPDET 406

  Fly   370 VAYGAAVQAAILTGVGSSQIQDLLLVDVAPLSLGIETAGGVMTNLVERNARIPCKQQQIFTTYSD 434
            ||.|||:|..||:|    :|:::||:||.||:|||||.||..:.|:.||..:|.|:.:||:|..|
Yeast   407 VALGAAIQGGILSG----EIKNVLLLDVTPLTLGIETFGGAFSPLIPRNTTVPVKKTEIFSTGVD 467

  Fly   435 NQNAVTIQVYEGERAMTKDNNLLGTFNLTGIPPAPRGVPQIEVAFDLNADGILNVNAKDNSTGKS 499
            .|..|.|:|::|||.:.::|.|:|...||||.|.|:|:|||.|.||::||||:||:|.:.|:||.
Yeast   468 GQAGVDIKVFQGERGLVRNNKLIGDLKLTGITPLPKGIPQIYVTFDIDADGIINVSAAEKSSGKQ 532

  Fly   500 EKITISNDKGRLSKAEIDRMLSEAEKYKVEDD--RQRERVQSKNNLEAYIYACRQAVDDAPSGVL 562
            :.||:..:.| ||:.||.:::.||...:.:|:  |||..:.||.::                 ::
Yeast   533 QSITVIPNSG-LSEEEIAKLIEEANANRAQDNLIRQRLELISKADI-----------------MI 579

  Fly   563 SETER--SKVRDKCSSEASWLDKNSLAEKEEFESHLKECQRICTPIMSKIHGGKKGKSSM 620
            |:||.  .:.....|||..:  .|.:.:.:.....:|..:.....:...::|.||...::
Yeast   580 SDTENLFKRYEKLISSEKEY--SNIVEDIKALRQAIKNFKANENDMSIDVNGIKKATDAL 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-2NP_524339.1 PTZ00009 1..632 CDD:240227 263/645 (41%)
HSPA1-2_6-8-like_NBD 6..382 CDD:212675 179/401 (45%)
SSQ1NP_013473.1 dnaK 29..656 CDD:234715 263/645 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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