DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsc70-2 and BIP3

DIOPT Version :9

Sequence 1:NP_524339.1 Gene:Hsc70-2 / 41609 FlyBaseID:FBgn0001217 Length:633 Species:Drosophila melanogaster
Sequence 2:NP_172382.4 Gene:BIP3 / 837429 AraportID:AT1G09080 Length:675 Species:Arabidopsis thaliana


Alignment Length:629 Identity:359/629 - (57%)
Similarity:478/629 - (75%) Gaps:14/629 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IGIDLGTTYSCVGVWQNSKVEIIANDQGNRTTPSYVAFNETERLIGDPAKNQVAMNAKNTVFDAK 71
            ||||||||||||||:.|..|||||||||||.|||:|||.:||||||:.||||.|.|.:.|:||.|
plant    53 IGIDLGTTYSCVGVYHNKHVEIIANDQGNRITPSWVAFTDTERLIGEAAKNQAAKNPERTIFDPK 117

  Fly    72 RLIGRKFDDKKIQEDLKLWPFKVINEKGKPKIEVEFKGERKRFAPEEISSMVLTKMREIAEVYLG 136
            |||||||||..:|.|:|..|:||:|:.|||.|:|:.|||.|.|:|||||:|:||||:|.||.:||
plant   118 RLIGRKFDDPDVQRDIKFLPYKVVNKDGKPYIQVKVKGEEKLFSPEEISAMILTKMKETAEAFLG 182

  Fly   137 GKVKDAVVTVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGERNVLIFDLG 201
            .|:||||:||||||||:|||||||||:||||||:|||||||.||:||||||. .||.|:|::|||
plant   183 KKIKDAVITVPAYFNDAQRQATKDAGAIAGLNVVRIINEPTGAAIAYGLDKK-GGESNILVYDLG 246

  Fly   202 GGTFDVSVLSIDEGSLFEVKATAGDTHLGGEDFDNRLVNHFAEEFKRKHKSDIKGNARALRRLRT 266
            |||||||:|:||.| :|||.:|:|||||||||||:|::::|.:..|:|:..||..:.:||.:||.
plant   247 GGTFDVSILTIDNG-VFEVLSTSGDTHLGGEDFDHRVMDYFIKLVKKKYNKDISKDHKALGKLRR 310

  Fly   267 ACERAKRTLSSSTEASLEIDALHEGIDFYSKISRARFEELNMDLFRSTMQPVERALSDAKMDKKA 331
            .||.|||:||:..:..:||::|.:|:||...::||||||||||||:.||:||::||.||.:.|..
plant   311 ECELAKRSLSNQHQVRVEIESLFDGVDFSEPLTRARFEELNMDLFKKTMEPVKKALKDAGLKKSD 375

  Fly   332 IHDVVLVGGSTRIPKIQKLLQDLFGGKQLNLSINPDEAVAYGAAVQAAILTGVGSSQIQDLLLVD 396
            |.::|||||||||||:|::|:|.|.||:.:...|||||||||||||..:|:|.|..:.|::||:|
plant   376 IDEIVLVGGSTRIPKVQQMLKDFFDGKEPSKGTNPDEAVAYGAAVQGGVLSGEGGEETQNILLLD 440

  Fly   397 VAPLSLGIETAGGVMTNLVERNARIPCKQQQIFTTYSDNQNAVTIQVYEGERAMTKDNNLLGTFN 461
            ||||||||||.||||||::.||..||.|:.|:||||.|.|..|||.||||||:|||||..||.|:
plant   441 VAPLSLGIETVGGVMTNIIPRNTVIPTKKSQVFTTYQDQQTTVTINVYEGERSMTKDNRELGKFD 505

  Fly   462 LTGIPPAPRGVPQIEVAFDLNADGILNVNAKDNSTGKSEKITISNDKGRLSKAEIDRMLSEAEKY 526
            ||||.|||||||||||.|:::|:|||.|.|:|.....|:.|||:||||||::.||:.|:.|||::
plant   506 LTGILPAPRGVPQIEVTFEVDANGILQVKAEDKVAKTSQSITITNDKGRLTEEEIEEMIREAEEF 570

  Fly   527 KVEDDRQRERVQSKNNLEAYIYACRQAVDDAP--SGVLSETERSKVRDKCSSEASWLDKNSLAEK 589
            ..||...:|::.::|.||.|:|..:..|.|..  :..:|:.::.|:.........||::|..|||
plant   571 AEEDKIMKEKIDARNKLETYVYNMKSTVADKEKLAKKISDEDKEKMEGVLKEALEWLEENVNAEK 635

  Fly   590 EEFESHLKECQRICTPIMSKIHGGKKGKSSMGKGSHPTVEEVDG 633
            |:::..|||.:.:|.|::..::...:|::          |:.||
plant   636 EDYDEKLKEVELVCDPVIKSVYEKTEGEN----------EDDDG 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-2NP_524339.1 PTZ00009 1..632 CDD:240227 357/626 (57%)
HSPA1-2_6-8-like_NBD 6..382 CDD:212675 240/374 (64%)
BIP3NP_172382.4 HSPA5-like_NBD 50..423 CDD:212681 240/371 (65%)
PTZ00009 53..658 CDD:240227 355/606 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53894
OrthoDB 1 1.010 - - D288077at2759
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100083
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.730

Return to query results.
Submit another query.