DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-2 and hspa12b

DIOPT Version :9

Sequence 1:NP_524339.1 Gene:Hsc70-2 / 41609 FlyBaseID:FBgn0001217 Length:633 Species:Drosophila melanogaster
Sequence 2:NP_001036151.1 Gene:hspa12b / 735291 ZFINID:ZDB-GENE-070226-1 Length:691 Species:Danio rerio


Alignment Length:674 Identity:138/674 - (20%)
Similarity:234/674 - (34%) Gaps:212/674 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IGIDLGTT---YSCVGVWQNSKVEIIANDQG------NRTTPSYVAFNETERLIGDPAKNQVAMN 62
            :.||.|||   |:...:.....:.::...:|      |:.:|:.:.      |..|...:.....
Zfish    63 VAIDFGTTSSGYAFSFIEDPETIHMMRRWEGGDPGVANQKSPTCLL------LTPDLRFHSFGFA 121

  Fly    63 AKNTVFDAKRLIGRKFDDKKIQEDLKLWPFKV-INEKGKPKIEVEFKG-ERKRFAPEEISSMVLT 125
            |:::..|        .|.::.:..|....||: |:......:|.|.:. ..:|....|:.:..|.
Zfish   122 ARDSYHD--------LDPEEARHWLYFDKFKMKIHSTSDLTMETELESVSGRRVQAIEVFAHALR 178

  Fly   126 KMREIA---------EVYLGGKVKDAVVTVPAYFNDSQRQATKDAGSIAGL------NVLRIINE 175
            ..||.|         .|..|.:|: .|:||||.:....:|..::|..:|||      ..|.|..|
Zfish   179 FFREHALKEVKDQSSSVLEGNEVR-WVITVPAVWRQPAKQFMREAAYLAGLVPPDSPEQLLIALE 242

  Fly   176 PTAAAL------------------AYGLDKNLKGER----------------------------- 193
            |.||::                  ..|.|  :.|.|                             
Zfish   243 PEAASIYCRKLRLHQVTDLSQRPVTNGFD--IDGSRPFDSSFRQAREQLRRARHSRTFLVESGTG 305

  Fly   194 ----------NVLIFDLGGGTFDVSVLSID--EGSLFEV-KATAGDTHLGGED--FDNRLV---- 239
                      ..::.|.||||.|::|..|:  :|:|.|: ||:.|.....|.|  |:..|.    
Zfish   306 ELWSEMQTGDRYIVADCGGGTVDLTVHQIEQPQGTLKELYKASGGPYGAVGVDLAFETMLCQIFG 370

  Fly   240 NHFAEEFKRKHKSDIKGNARALRRLRTACERAKRTLSSSTEASLEIDALHEGIDFYS-------- 296
            ..|.:.||.|..:       |...|..|.|..|||.:.....:|.|......||||.        
Zfish   371 TDFIDSFKAKRPA-------AWVDLTIAFEARKRTAAPGRANTLNISLPFSFIDFYKQHRGQSVE 428

  Fly   297 ---KISRARF------------EELNMDLFRSTMQPVERALSDA--KMDKKAIHDVVLVGGSTRI 344
               :.|...|            .|...:||:.|:..:.:.:.:.  |.:.|.:..:.||||....
Zfish   429 TALRKSNMNFIKWSSQGMLRLSTEATNELFQPTINNIIKHIENVMQKEEVKGVRFLFLVGGFAES 493

  Fly   345 PKIQKLLQDLFGGKQLNLSINPDEAVAYGAAVQAAILTGVGSSQIQDLLLVDVAPLSLGIETAGG 409
            |.:|:.:|:.. |:...:.|..|..:   ..::.|:|.|:..:.::    |...||:.|:    |
Zfish   494 PMLQRAIQNTL-GRNCRIIIPHDVGL---TILKGAVLFGLDPTVVR----VRRCPLTYGV----G 546

  Fly   410 VMTNLVE----------RNARIPCKQ------------------QQIFTTYSDNQNAVTIQVYEG 446
            |:...||          ::.|..|..                  ::.:|.....|..:.|.:|..
Zfish   547 VLNRFVEGRHPHDKLLIKDGREWCTDILDRFVSVDQSVALGEVVRRSYTPARMGQRKIIINIYCS 611

  Fly   447 ERAMTKDNNLLGTFNLTGIPPAPRGVPQI-EVAFDLNADGILNVNAKDNSTGKS----------- 499
            :           |.::|.|  ...||.:. .:..||...|..:.:..||..|.:           
Zfish   612 D-----------TDDITYI--TDPGVRKCGAITLDLLESGEASASTGDNDKGSAFERREIRTTMQ 663

  Fly   500 -----EKIT-ISNDKGRLSKAEID 517
                 .|:| :....|||.:|.||
Zfish   664 FGDTEIKVTAVDVATGRLVRASID 687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-2NP_524339.1 PTZ00009 1..632 CDD:240227 138/674 (20%)
HSPA1-2_6-8-like_NBD 6..382 CDD:212675 103/491 (21%)
hspa12bNP_001036151.1 HSPA12B_like_NBD 61..529 CDD:212686 104/493 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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