DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsc70-2 and hspa14

DIOPT Version :9

Sequence 1:NP_524339.1 Gene:Hsc70-2 / 41609 FlyBaseID:FBgn0001217 Length:633 Species:Drosophila melanogaster
Sequence 2:NP_001038541.1 Gene:hspa14 / 565232 ZFINID:ZDB-GENE-041210-73 Length:504 Species:Danio rerio


Alignment Length:510 Identity:184/510 - (36%)
Similarity:293/510 - (57%) Gaps:26/510 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 AIGIDLGTTYSCVGVWQNSKVEIIANDQGNRTTPSYVAFNETERLIGDPAKNQVAMNAKNTVFDA 70
            |||:..|.|.:||.|:::.:.:::|||.|:|.||:.||:.:||:::|..||.....||.|||...
Zfish     3 AIGVHFGYTCACVAVFKDGRADVVANDAGDRVTPAVVAYRDTEQIVGIAAKQGRIRNAANTVVKV 67

  Fly    71 KRLIGRKFDDKKIQEDLKLWPFKVINEKGKPKIEVEFKGERKRFAPEEISSMVLTKMREIAEVYL 135
            |:::||::||...|...:.....|:|:.|.|:.|::.....|..:||:::.::..||:|.|:..|
Zfish    68 KQILGRRYDDPDAQAHKEESKCIVVNKSGLPRYEIDTGETTKYVSPEDVAKLIFHKMKETAQSAL 132

  Fly   136 GGKVKDAVVTVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAY--GLDKNLKGERNVLIF 198
            |..|||||:|||..|::.|:.|.:.|...||.||||:|:||:||.|||  |.|..| |:.:||::
Zfish   133 GSDVKDAVITVPFEFDEMQKNALRQAAESAGFNVLRLIHEPSAALLAYDIGQDSPL-GKSHVLVY 196

  Fly   199 DLGGGTFDVSVLSIDEGSLFEVKATAGDTHLGGEDFDNRLVNHFAEEFKRKHKSDIKGNARALRR 263
            .|||.:..|:||.::.| ::.|.||..|...|||.|...|..|.|.|||:..|.|:.|||||:.:
Zfish   197 KLGGTSLSVTVLEVNSG-VYRVLATQTDHQTGGESFTQELAQHLAAEFKKTFKQDVSGNARAMMK 260

  Fly   264 LRTACERAKRTLSSSTEASLEIDALHEGIDFYSKISRARFEELNMDLFRSTMQPVERALSDAKMD 328
            |..:.:.||.|||:...|:..:|:|::|:||...:||||||.:...||...:||::..|....:.
Zfish   261 LMNSADVAKHTLSTLGSANCFVDSLYDGMDFECNVSRARFELICSSLFNKCIQPIKSLLEQVNLS 325

  Fly   329 KKAIHDVVLVGGSTRIPKIQKLLQDLFGGKQLNLSINPDEAVAYGAAVQAAILTGVGSSQI-QDL 392
            ...::.|||.|||.||||:|::::|||...:|..||.|||.:..|||:||.||.|..|..: :|.
Zfish   326 TSDVNKVVLSGGSARIPKLQQMIRDLFPDVELLNSIPPDEVIPVGAAMQAGILVGKDSLALGEDS 390

  Fly   393 LLVDVAPLSL--------GIETAGGVMTNLVERNARIPCKQQQIFTTYSDNQNAVTIQVYEGERA 449
            :.||.....:        |:|    |.|.|......:|.::|..... ..:.::|.:|:::.::.
Zfish   391 ITVDCCASDITLKEVDDSGLE----VFTVLFPSGTPLPARRQHTLQG-PGSLSSVRLQLFQAQQP 450

  Fly   450 MTKDNNLLGTFNLTGIPPAPRGVPQIEVAFDLNADGILNVNAKDNSTGKSEKITI 504
            :.:       ..|..:.|... :..:.....:..||.|:|...:.|:|:||.|||
Zfish   451 IAQ-------IVLGDLEPKEE-LHDVVTVLTMKRDGSLHVTCTEQSSGRSEAITI 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-2NP_524339.1 PTZ00009 1..632 CDD:240227 184/510 (36%)
HSPA1-2_6-8-like_NBD 6..382 CDD:212675 156/377 (41%)
hspa14NP_001038541.1 HSPA14-like_NBD 2..376 CDD:212680 154/374 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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