DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-2 and hspa12a.2

DIOPT Version :9

Sequence 1:NP_524339.1 Gene:Hsc70-2 / 41609 FlyBaseID:FBgn0001217 Length:633 Species:Drosophila melanogaster
Sequence 2:XP_003198604.1 Gene:hspa12a.2 / 559237 ZFINID:ZDB-GENE-061009-20 Length:571 Species:Danio rerio


Alignment Length:599 Identity:129/599 - (21%)
Similarity:245/599 - (40%) Gaps:137/599 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IGIDLGTTYSCVGVWQNSKVE----IIAN---DQGNRT--TPSYVAFNETE--RLIGDPA----- 55
            |.||.||:||...:...:|..    :|.|   |.|..|  ||:.:.|:|.|  :..|..|     
Zfish     8 IAIDFGTSYSGYAISFKTKQPQESILIPNWGVDYGYNTFKTPTCILFDEHETFQKFGYDAMMTYT 72

  Fly    56 KNQVAMNA-KNTVFDAKRLIGRKFDDKKIQEDLKLWPFKVINEKGKPKIEVEFKGERKRFAPEEI 119
            ::.|...| |:.:|:..::   :..||:|..||.:    .....|:.|....| .|..|:    :
Zfish    73 RSTVKSQARKSFLFEHFKM---ELYDKEIHRDLMI----TAKNGGQMKALTVF-SESLRY----L 125

  Fly   120 SSMVLTKMRE--IAEVYLGGKVKDAVVTVPAYFNDSQRQATKDAGSIAGLNV------LRIINEP 176
            ....|.|::|  ..:.::...| ..|:||||.:|.:.:|..::|...|||.:      |....||
Zfish   126 KDHALEKVKENPTGKTFIASDV-TWVLTVPAIWNAAAKQFMREAAIEAGLVIESEPERLVFALEP 189

  Fly   177 TAAALAYGLDKNLKGERNV-----------------LIFDLGGGTFDVSVLS-IDEGSLFEVKAT 223
            .||::   ..|:|..|..:                 ::.|.||||.|::|.. :::|.|.|:.|.
Zfish   190 EAASI---YCKHLPSEGYISEEACRDTLEQKPGTQYMVVDCGGGTIDITVHEVVEDGKLKELNAA 251

  Fly   224 AGDTHLGGEDFDNRLVNH----FAEEFKRKHKSDIKGNARALR---RLRTACE-----RAKRTLS 276
            :|: .:||:..|.:.::.    |:|:...|.:.|....|..|:   .|..:|:     :...||.
Zfish   252 SGN-DMGGQTVDRKFISFLKEIFSEKIYNKFEQDFPAEALKLKYDIALAKSCDQLVLIQCPVTLQ 315

  Fly   277 SSTEASLEIDALHEGIDFYSKISRARFEELNM------------DLFRSTMQPVERALSDAKMDK 329
            ...:....|::..||::      .|.::|.::            :..::|.:.:|:..|:.::: 
Zfish   316 ELAKKEKAIESYFEGVE------GAEWDEGSIIIKEDKLQSFFDESLKTTAEKLEKITSNPELN- 373

  Fly   330 KAIHDVVLVGGSTRIPKIQKLLQDLFGGKQLNLSINPDEAVAYGAAVQAAILTGVGSSQIQDL-- 392
              |..::||||......::|.|::.|...::...:.|...:..| |::.|....|..|::..|  
Zfish   374 --IEYMLLVGGFAECKILKKFLKERFDKCKIVCPVEPQVVIIKG-AIRYAKQPKVVKSRMSALTY 435

  Fly   393 -LLVDVAPL--------SLGIETAGGVMTNL-----VERNARIPCKQ--QQIFTTYSDNQNAVTI 441
             :.:| ||.        |..:.:.|....::     |.:...:.|.:  |..|.....||.:...
Zfish   436 GIRID-APFDKVLHKDKSNYVNSEGQTYCDVCFETFVRKGESVNCDEVRQFFFNPSHTNQTSAIF 499

  Fly   442 QVYEGERAMTKDNNL----------LGTFNLTGIPPAPRGVP---QIEVAFDLNADGILNVNAKD 493
            |.:.     |.:..:          :|.|.: |:|....|:.   ::|:.|     |...:.|..
Zfish   500 QFFS-----TNEKQVQFIDEPGVEPVGFFEV-GMPKTDGGLSREIKLEIKF-----GSTEMKATA 553

  Fly   494 NSTGKSEKITISND 507
            ......|..::.:|
Zfish   554 TDVDSGETTSVKHD 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-2NP_524339.1 PTZ00009 1..632 CDD:240227 129/599 (22%)
HSPA1-2_6-8-like_NBD 6..382 CDD:212675 102/441 (23%)
hspa12a.2XP_003198604.1 HSPA12_like_NBD 6..420 CDD:212671 101/438 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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