DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-2 and hspa12a.3

DIOPT Version :9

Sequence 1:NP_524339.1 Gene:Hsc70-2 / 41609 FlyBaseID:FBgn0001217 Length:633 Species:Drosophila melanogaster
Sequence 2:NP_001038346.3 Gene:hspa12a.3 / 559031 ZFINID:ZDB-GENE-030131-8896 Length:571 Species:Danio rerio


Alignment Length:599 Identity:127/599 - (21%)
Similarity:242/599 - (40%) Gaps:141/599 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IGIDLGTTYSCVGVWQNSK-----VEI----IANDQGNRTTPSYVAFNETE--RLIGDPA----- 55
            |.||.||:||...:...:|     ::|    :........||:.:.|:|.|  :..|..|     
Zfish     8 IAIDFGTSYSGYAISFKTKQPQESIQIPNWGVNFGYNTFKTPTCILFDEHETFQKFGYDAMMTYT 72

  Fly    56 ----KNQVAMNAKNTVFDAKRLIGRKFDDKKIQEDLKLWPFKVINEKGKPKIEVEFKGERKRFAP 116
                |:|.   .|:.:|:..::   :..||:|..||.:    .....|:.|....| .|..|:  
Zfish    73 RSTPKSQA---RKSFLFEHFKM---ELYDKEIHRDLMI----TAKNGGQMKALTVF-SESLRY-- 124

  Fly   117 EEISSMVLTKMRE--IAEVYLGGKVKDAVVTVPAYFNDSQRQATKDAGSIAGLNV------LRII 173
              :....|.|::|  ..:.::...| ..|:||||.:|.:.:|..::|...|||.:      |...
Zfish   125 --LKDHALEKIKENTTGKTFIASDV-TWVLTVPAIWNAAAKQFMREAAIEAGLVIESEPERLVFA 186

  Fly   174 NEPTAAALAYGLDKNLKGERNV-----------------LIFDLGGGTFDVSVLS-IDEGSLFEV 220
            .||.||::   ..|.|..|..:                 ::.|.||||.|::|.. :::|.|.|:
Zfish   187 LEPEAASI---YCKQLPSEGYISEEACRDTLEQKPGTQYMVVDCGGGTIDITVHEVVEDGKLKEL 248

  Fly   221 KATAGDTHLGGEDFDNRLVNH----FAEEFKRKHKSDIKGNARALR---RLRTACE-----RAKR 273
            .|.:|: .:||:..|.:.::.    |:|:...|.:.|....|..|:   .|..:|:     :...
Zfish   249 NAASGN-DMGGQTVDRKFISFLKEIFSEKIYNKFEQDFPAEALKLKYDIALAKSCDQLVLIQCPV 312

  Fly   274 TLSSSTEASLEIDALHEGIDFYSKISRARFEELNM------------DLFRSTMQPVERALSDAK 326
            ||....:....|::..||::      .|.::|.::            :..::|.:.:|:.:|:.:
Zfish   313 TLQDLAKKEKAIESYFEGVE------GAEWDEGSIIIKEDKLQSFFDESLKTTAEKLEKIMSNPE 371

  Fly   327 MDKKAIHDVVLVGGSTRIPKIQKLLQDLFGGKQLNLSINPDEAVAYGAAVQAAILTGVGSSQIQD 391
            ::   |..::||||......::|.|::.|...::...:.|...:..| |::.|....|..|::..
Zfish   372 LN---IEYMLLVGGFAECKILKKFLKERFDKCKIVCPVEPQVVIIKG-AIRYAKQPKVVKSRMSA 432

  Fly   392 L---LLVDVAPL-------------SLGIETAGGVMTNLVERNARIPCKQ-QQIFTTYSD-NQNA 438
            |   :.:| ||.             |.|...........|.:...:.|.: :|.|...|| ||..
Zfish   433 LTYGIRID-APFDKVLHKGKTSYVNSEGQTYCDVCFETFVRKGESVNCDEVRQFFFNPSDTNQTF 496

  Fly   439 VTIQVYEGERAMTKDNNL----------LGTFNLTGIPPAPRGVP---QIEVAFDLNADGILNVN 490
            .|.|.:.     |.:..:          :|.|.: |:|....|:.   ::|:.|....   :...
Zfish   497 ATFQFFS-----TNEKQVQFIDEPGVESVGVFQV-GMPKTDGGLSREIKLEIKFGSTE---MKAT 552

  Fly   491 AKDNSTGKSEKITI 504
            |.|..:|::..:.:
Zfish   553 ATDVDSGETTSVKL 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-2NP_524339.1 PTZ00009 1..632 CDD:240227 127/599 (21%)
HSPA1-2_6-8-like_NBD 6..382 CDD:212675 98/444 (22%)
hspa12a.3NP_001038346.3 HSPA12_like_NBD 6..420 CDD:212671 97/441 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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