DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-2 and hspa13

DIOPT Version :9

Sequence 1:NP_524339.1 Gene:Hsc70-2 / 41609 FlyBaseID:FBgn0001217 Length:633 Species:Drosophila melanogaster
Sequence 2:NP_001017223.1 Gene:hspa13 / 549977 XenbaseID:XB-GENE-963595 Length:476 Species:Xenopus tropicalis


Alignment Length:433 Identity:160/433 - (36%)
Similarity:240/433 - (55%) Gaps:56/433 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IGIDLGTTYSCVGVWQ--NSKVEIIANDQGNRTTPSYVAFNETERLIGDPAKNQVAMNAKNTVFD 69
            |||||||||..|||:.  ..:|.:|.::.|:::.||.|:|.|.:..:|.........|.:||::|
 Frog    34 IGIDLGTTYCSVGVFHPGTGEVRVITDENGHQSIPSIVSFTEKDVFVGYDGLELADANPQNTIYD 98

  Fly    70 AKRLIGRKFDDKKIQEDLKLWPFKVINEKGKPKIEVEFKGERKRFAPEEISSMVLTKMREIAEVY 134
            |||.||:.|..::::::...:.|||:|..|.....|. ..|.....||.|||.:|.|::::||.|
 Frog    99 AKRFIGKIFTQEELEKESVRYQFKVLNRNGDVFFSVS-TNETFAVTPEYISSQLLLKLKKMAEDY 162

  Fly   135 LGGKVKDAVVTVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGERNVLIFD 199
            ||..|..||::|||.|::.||..|..|.::|||::||:||||||||:||||.|  ....|||:.|
 Frog   163 LGLPVSKAVISVPAEFDERQRNYTVKAANLAGLDILRVINEPTAAAMAYGLHK--VDVFNVLVVD 225

  Fly   200 LGGGTFDVSVLSIDEGSLFEVKATAGDTHLGGEDFDNRLVNHFAEEFKRKHKSDIKGNARALRRL 264
            |||||.|||:|: .:|.:|..:|.||:..|||:||:.||:.:..::...::.| :......:.||
 Frog   226 LGGGTLDVSLLN-KQGGMFLTRAMAGNNKLGGQDFNQRLLQYLYDKIYTRYGS-VPSQKEEIHRL 288

  Fly   265 RTACERAKRTL----SSSTEASLEIDALH------------------------------------ 289
            |.|.|..|..|    ||.....|.:.:.|                                    
 Frog   289 RQAVEAIKLNLTLHNSSWVRMPLTLASTHPDSSKPDKIIPNESLENTGEIHPKSAHLGDSYSSSG 353

  Fly   290 --------EGIDFYSKISRARFEELNMDLFRSTMQPVERALSDAKMDKKAIHDVVLVGGSTRIPK 346
                    |.:.|..:|:|..||.||.|||:..:.|||:.|.:..:.|:.:.::||||||||||:
 Frog   354 PQIQNKHAEKVYFEMEITRHIFETLNEDLFQKILIPVEQVLKEGHVLKEEVDEIVLVGGSTRIPR 418

  Fly   347 IQKLLQDLFGGKQLNLSINPDEAVAYGAAVQAAILTGVGSSQI 389
            |:::::|.| ||..|.|::||.||..|.|:||.|:.|....|:
 Frog   419 IRQVIRDFF-GKDPNTSVDPDLAVVTGVAIQAGIMGGSWPLQV 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-2NP_524339.1 PTZ00009 1..632 CDD:240227 160/433 (37%)
HSPA1-2_6-8-like_NBD 6..382 CDD:212675 158/424 (37%)
hspa13NP_001017223.1 HSPA13-like_NBD 23..468 CDD:212679 160/433 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D288077at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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