DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-2 and Hspa12b

DIOPT Version :10

Sequence 1:NP_524339.1 Gene:Hsc70-2 / 41609 FlyBaseID:FBgn0001217 Length:633 Species:Drosophila melanogaster
Sequence 2:NP_001381945.1 Gene:Hspa12b / 311427 RGDID:1312004 Length:685 Species:Rattus norvegicus


Alignment Length:654 Identity:151/654 - (23%)
Similarity:234/654 - (35%) Gaps:212/654 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 IIANDQGNRTTPSYVAFN-----ETERLI-----GDPAKNQVAMNAKNT--------VFDAKRLI 74
            ::|.|.|  ||.|..||:     |...::     |||.   ||.....|        :|.:....
  Rat    62 VVAIDFG--TTSSGYAFSFATDPEAIHMMRKWEGGDPG---VAHQKTPTCLLLTPEGIFHSFGYT 121

  Fly    75 GRKF----DDKKIQEDLKLWPFKV----------------INEKGKPKIEVEFKGERKRFAPEEI 119
            .|.:    |.::.::.|....||:                :|  ||..:.:|......||..|. 
  Rat   122 ARDYYHDLDPEEARDWLYFEKFKMKIHSATDLTLKTQLEAVN--GKKMLALEVFAHALRFFKEH- 183

  Fly   120 SSMVLTKMREIAEVYLGGKVKDA---VVTVPAYFNDSQRQATKDAGSIAGL------NVLRIINE 175
               .|.::||.:|..|   .|||   |:||||.:....:|..::|..:|||      ..|.|..|
  Rat   184 ---ALQELREQSECML---EKDAVRWVLTVPAIWKQPAKQFMREAAYLAGLVSREDAEKLLIALE 242

  Fly   176 PTAAAL-----------------AYG--------LDKNLKGERNVL------------------- 196
            |.||::                 |.|        :|.:.:..|..|                   
  Rat   243 PEAASVYCRKLRLHQLMDLSSRTAGGGRLGERRSIDSSFRHAREQLRRSRHSRTFLVESGVGELW 307

  Fly   197 ----------IFDLGGGTFDVSVLSIDE--GSLFEV-KATAGDTHLGGED--FDNRLVNHFAEEF 246
                      :.|.||||.|::|..:::  |:|.|: ||:.|.....|.|  |:..|...|.|:|
  Rat   308 SEMQEGDRYMVADCGGGTVDLTVHQLEQPHGTLKELYKASGGPYGAVGVDLAFEQLLCRIFGEDF 372

  Fly   247 KRKHKSDIKGNARALRRLRTACERAKRTLSSSTEASLEIDALHEGIDFYSK-------------- 297
            ..|.|   :....|...|..|.|..|||.......:|.|......||||.|              
  Rat   373 IAKFK---RQRPAAWVDLTIAFEARKRTAGPHRAGALNISLPFSFIDFYRKQRGHNVETALRRSS 434

  Fly   298 ----------ISRARFEELNMDLFRST----MQPVERALSDAKMDKKAIHDVVLVGGSTRIPKIQ 348
                      :.|...|.:| :||:.|    :|.:|..|  ||.:.:.:..:.||||......:|
  Rat   435 VNFVKWSSQGMLRMSCEAMN-ELFQPTVSGIIQHIEMLL--AKPEVQGVKLLFLVGGFAESAVLQ 496

  Fly   349 KLLQDLFGGKQLNLSINPDEAVAYGAAVQAAILTGVGSSQIQDLLLVDVAPLSLGIETAGGVMT- 412
            ..:|:..|.:.|.:.:..|..:   ..::.|:|.|    |...::.|..:||:.|:    ||:. 
  Rat   497 HAVQEALGNRGLRVVVPHDVGL---TILKGAVLFG----QAPGVVRVRRSPLTYGV----GVLNR 550

  Fly   413 ---------NLVERNARIPCKQ---------------QQIFTTY---SDNQNAVTIQVY----EG 446
                     .|:.|:.|..|..               :::..:|   ...|..|.|.:|    |.
  Rat   551 FVPGHHPPEKLLVRDGRRWCTDVFERFVAAEQSVALGEEVRRSYCPARPGQRRVLINLYCCAAED 615

  Fly   447 ERAMTKDN-NLLGTFNL----------TGIPPAPRGVPQIEVAFDLNADGILNVNAKDNSTGKSE 500
            .|.:|... ...|..:|          ||..|:.|   :|..|... .|..:.|.|.|.||.:|.
  Rat   616 ARFITDPGVRKCGALSLELEPEGSPENTGTSPSRR---EIRAAMQF-GDTEIKVTAVDVSTNRSV 676

  Fly   501 KITI 504
            :..|
  Rat   677 RAAI 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-2NP_524339.1 PTZ00009 1..632 CDD:240227 151/654 (23%)
Hspa12bNP_001381945.1 ASKHA_ATPase-like 61..528 CDD:483947 115/488 (24%)

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