DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-2 and Hspa12a

DIOPT Version :9

Sequence 1:NP_524339.1 Gene:Hsc70-2 / 41609 FlyBaseID:FBgn0001217 Length:633 Species:Drosophila melanogaster
Sequence 2:XP_017444569.1 Gene:Hspa12a / 307997 RGDID:1305531 Length:691 Species:Rattus norvegicus


Alignment Length:652 Identity:147/652 - (22%)
Similarity:232/652 - (35%) Gaps:194/652 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IGIDLGTTYS-----------CVGV---WQNSKVEIIANDQG--NRTTPSYVAFNETERLIGDPA 55
            :.||.|||.|           |:.|   |:       ..|.|  |:.||:.:......:.     
  Rat    75 VAIDFGTTSSGYAYSFTKEPECIHVMRRWE-------GGDPGVSNQKTPTTILLTPERKF----- 127

  Fly    56 KNQVAMNAKNTVFDAKRLIGRKFDDKKIQEDLKLWPFKV-INEKGKPKIEVEFKGER-KRFAPEE 118
             :.....|::...|        .|..:.::.|.|..||: ::..|...::.:..... |:....|
  Rat   128 -HSFGYAARDFYHD--------LDPNEAKQWLYLEKFKMKLHTTGDLTMDTDLTAANGKKVKALE 183

  Fly   119 ISSMVLTKMREIAEVYL----GGKVKDA----VVTVPAYFNDSQRQATKDAGSIAGL------NV 169
            |.:..|...:|.|...|    |...:::    |:||||.:....:|..::|...|||      ..
  Rat   184 IFTYALQYFKEQALKELSDQAGSDFENSDVRWVITVPAIWKQPAKQFMREAAYQAGLASPENSEQ 248

  Fly   170 LRIINEPTAAAL--------------------AYG-------------------------LDKNL 189
            |.|..||.||::                    .|.                         |.:|:
  Rat   249 LIIALEPEAASIYCRKLRLHQMIELSSKAVVNGYSASDTVGAGFAQAKEHVRRNRQSRTFLVENV 313

  Fly   190 KGE--------RNVLIFDLGGGTFDVSV--LSIDEGSLFEV-KATAGDTHLGGED--FDNRLVNH 241
            .||        ...::.|.||||.|::|  :.:.||.|.|: |||.|.....|.|  |:..|...
  Rat   314 IGEIWSELEEGDKYVVVDSGGGTVDLTVHQIRLPEGHLKELYKATGGPYGSLGVDYEFEKLLCKI 378

  Fly   242 FAEEFKRKHKSDIKGNARALRRLRTACERAKRTLSSSTEASLEIDALHEGIDFYSKISRARFE-- 304
            |.|:|..:.|  ||..| |...|..|.|..||..:......|.|......||:|.|......|  
  Rat   379 FGEDFIEQFK--IKRPA-AWVDLMIAFESRKRAAAPDRTNPLNITLPFSFIDYYKKFRGHSVEHA 440

  Fly   305 --ELNMD-------------------LFRSTMQPVERALSD--AKMDKKAIHDVVLVGGSTRIPK 346
              :.|:|                   ||:.|:..:...|.|  .|.:...:..:.||||....|.
  Rat   441 LRKSNVDFVKWSSQGMLRMSPDAMNALFKPTIDSIIEHLRDLFQKPEVSTVKFLFLVGGFAEAPL 505

  Fly   347 IQKLLQDLFGGKQLNLSINPDEAVAYGAAVQAAILTGVGSSQIQDLLLVDVAPLSLGIETAGGVM 411
            :|:.:|..||.| ..:.|..|..:   ..::.|:|.|:..:.|:    |..:||:.|:    ||:
  Rat   506 LQQAVQAAFGDK-CRIIIPQDVGL---TILKGAVLFGLDPAVIK----VRRSPLTYGV----GVL 558

  Fly   412 TNLVE----------RNARIPCKQ------------------QQIFTTYSDNQNAVTIQVYEGER 448
            ...||          ::....|..                  ::.:|....:|..:.|.:|..|.
  Rat   559 NRYVEGKHPPEKLLVKDGTRWCTDVFDKFISADQSVALGELVKRSYTPAKPSQLVIIINIYSSEN 623

  Fly   449 ---AMTKDNNL--LGT--FNLTGIP----PAPRGVPQIEVAFDLNADGILNVNAKDNSTGKSEKI 502
               :...|..:  .||  .:|||..    ||.|.: |..:.|   .|..:...|.|.:|.||.|:
  Rat   624 DDVSFITDPGVKKCGTLRLDLTGTSGAAVPARREI-QTLMQF---GDTEIKATAVDIATSKSVKV 684

  Fly   503 TI 504
            .|
  Rat   685 GI 686

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-2NP_524339.1 PTZ00009 1..632 CDD:240227 147/652 (23%)
HSPA1-2_6-8-like_NBD 6..382 CDD:212675 111/489 (23%)
Hspa12aXP_017444569.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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