DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-2 and Hspa14

DIOPT Version :9

Sequence 1:NP_524339.1 Gene:Hsc70-2 / 41609 FlyBaseID:FBgn0001217 Length:633 Species:Drosophila melanogaster
Sequence 2:NP_001004257.1 Gene:Hspa14 / 307133 RGDID:1303296 Length:509 Species:Rattus norvegicus


Alignment Length:505 Identity:178/505 - (35%)
Similarity:287/505 - (56%) Gaps:8/505 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 AIGIDLGTTYSCVGVWQNSKVEIIANDQGNRTTPSYVAFNETERLIGDPAKNQVAMNAKNTVFDA 70
            |||:.||.|.:||.|:::.:.:::|||.|:|.||:.||::|.|:::|..||.....|..:||...
  Rat     3 AIGVHLGCTSACVAVYKDGRADVVANDAGDRVTPAVVAYSEREQVVGLAAKQSRIRNISSTVVKV 67

  Fly    71 KRLIGRKFDDKKIQEDLKLWPFKVINEKGKPKIEVEFKGERKRFAPEEISSMVLTKMREIAEVYL 135
            |:::||...|.:.|:.:......||.:.||.:.|::...|.|..:||:::.::.:||:|.|...|
  Rat    68 KQILGRSTADPQAQKYISESKCLVIEKNGKLQYEIDTGEETKLVSPEDVARLIFSKMKETAHSVL 132

  Fly   136 GGKVKDAVVTVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNL-KGERNVLIFD 199
            |....|.|||||..|.:.|:.|..:|...||.||||:|:||:||.||||:.::. .|:.|||:|.
  Rat   133 GSDANDVVVTVPFDFGEKQKSALGEAAGAAGFNVLRLIHEPSAALLAYGIGQDCPTGKSNVLVFK 197

  Fly   200 LGGGTFDVSVLSIDEGSLFEVKATAGDTHLGGEDFDNRLVNHFAEEFKRKHKSDIKGNARALRRL 264
            |||.:..:|::.::.| ::.|.:|....::||..|.:.|..:.|.||:|..|.|::|:|||:.:|
  Rat   198 LGGTSLSLSIMEVNSG-MYRVLSTNTSDNIGGVHFTDSLAQYLASEFQRLFKHDVRGSARAMMKL 261

  Fly   265 RTACERAKRTLSSSTEASLEIDALHEGIDFYSKISRARFEELNMDLFRSTMQPVERALSDAKMDK 329
            ..:.|.||.:||:...|:..:|:|:||.||...:||||||.|...||...::.|...|..:....
  Rat   262 MNSAEVAKHSLSTLGSANCFVDSLYEGQDFDCNVSRARFELLCSPLFNKCIEAVRALLQQSGFTA 326

  Fly   330 KAIHDVVLVGGSTRIPKIQKLLQDLFGGKQLNLSINPDEAVAYGAAVQAAILTGVGSSQIQDLLL 394
            ..|:.|||.|||:|||::|:|::|||....|..||.|||.:..|||::|.||.|..|:...|.:|
  Rat   327 DDINKVVLCGGSSRIPRLQQLIKDLFPAGDLLNSIPPDEVIPIGAAIEAGILVGKESTSGDDSVL 391

  Fly   395 VDVAP---LSLGIETAG-GVMTNLVERNARIPCKQQQIFTTYSDNQNAVTIQVYEGE-RAMTKDN 454
            ::.:.   |..|::.:| ...|.|......:|.::|..... ..:.::|.:::||.| :...|:.
  Rat   392 IECSARDILVKGVDESGANRFTVLFPSGTPLPARRQHTLQA-PGSISSVCLELYESEGKNSVKEE 455

  Fly   455 NLLGTFNLTGIPPAPRGVPQIEVAFDLNADGILNVNAKDNSTGKSEKITI 504
            .......|..:.....|:..|.....:..||.|.|...|..|||.|.||:
  Rat   456 TKFAQVVLQDLDKKENGLRDILAVLTMKRDGSLQVTCTDQETGKCEAITV 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-2NP_524339.1 PTZ00009 1..632 CDD:240227 178/505 (35%)
HSPA1-2_6-8-like_NBD 6..382 CDD:212675 147/376 (39%)
Hspa14NP_001004257.1 HSPA14-like_NBD 2..376 CDD:212680 145/373 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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