DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-2 and Hspa1b

DIOPT Version :9

Sequence 1:NP_524339.1 Gene:Hsc70-2 / 41609 FlyBaseID:FBgn0001217 Length:633 Species:Drosophila melanogaster
Sequence 2:NP_001316825.1 Gene:Hspa1b / 108348108 RGDID:2840 Length:641 Species:Rattus norvegicus


Alignment Length:646 Identity:462/646 - (71%)
Similarity:531/646 - (82%) Gaps:19/646 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGKIPAIGIDLGTTYSCVGVWQNSKVEIIANDQGNRTTPSYVAFNETERLIGDPAKNQVAMNAKN 65
            |.|..|||||||||||||||:|:.||||||||||||||||||||.:|||||||.||||||:|.:|
  Rat     1 MAKKTAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQN 65

  Fly    66 TVFDAKRLIGRKFDDKKIQEDLKLWPFKVINEKGKPKIEVEFKGERKRFAPEEISSMVLTKMREI 130
            |||||||||||||.|..:|.|:|.|||:|:|:..|||::|.:|||.:.|.||||||||||||:||
  Rat    66 TVFDAKRLIGRKFGDPVVQSDMKHWPFQVVNDGDKPKVQVNYKGENRSFYPEEISSMVLTKMKEI 130

  Fly   131 AEVYLGGKVKDAVVTVPAYFNDSQRQATKDAGSIAGLNVLRIINEPTAAALAYGLDKNLKGERNV 195
            ||.|||..|.:||:||||||||||||||||||.|||||||||||||||||:|||||:..||||||
  Rat   131 AEAYLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNV 195

  Fly   196 LIFDLGGGTFDVSVLSIDEGSLFEVKATAGDTHLGGEDFDNRLVNHFAEEFKRKHKSDIKGNARA 260
            |||||||||||||:|:||:| :||||||||||.|||||||||||:||.||||||||.||..|.||
  Rat   196 LIFDLGGGTFDVSILTIDDG-IFEVKATAGDTDLGGEDFDNRLVSHFVEEFKRKHKKDISQNKRA 259

  Fly   261 LRRLRTACERAKRTLSSSTEASLEIDALHEGIDFYSKISRARFEELNMDLFRSTMQPVERALSDA 325
            :||||||||||||||||||:||||||:|.||||||:.|:|||||||..||||.|::|||:||.||
  Rat   260 VRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRGTLEPVEKALRDA 324

  Fly   326 KMDKKAIHDVVLVGGSTRIPKIQKLLQDLFGGKQLNLSINPDEAVAYGAAVQAAILTGVGSSQIQ 390
            |:||..|||:|||||||||||:||||||.|.|:.||.|||||||||||||||||||.|..|..:|
  Rat   325 KLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQ 389

  Fly   391 DLLLVDVAPLSLGIETAGGVMTNLVERNARIPCKQQQIFTTYSDNQNAVTIQVYEGERAMTKDNN 455
            ||||:||||||||:||||||||.|::||:.||.||.|.||||||||..|.|||||||||||:|||
  Rat   390 DLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTRDNN 454

  Fly   456 LLGTFNLTGIPPAPRGVPQIEVAFDLNADGILNVNAKDNSTGKSEKITISNDKGRLSKAEIDRML 520
            |||.|.|:||||||||||||||.||::|:|||||.|.|.||||:.||||:||||||||.||:||:
  Rat   455 LLGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMV 519

  Fly   521 SEAEKYKVEDDRQRERVQSKNNLEAYIYACRQAV-DDAPSGVLSETERSKVRDKCSSEASWLDKN 584
            .|||:||.||:.|||||.:||.||:|.:..:.|| |:...|.:||.::.||.|||....||||.|
  Rat   520 QEAERYKAEDEVQRERVAAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDSN 584

  Fly   585 SLAEKEEFESHLKECQRICTPIMSKIHGG-------------KKGKSSMGKGSHPTVEEVD 632
            :|||||||....:|.:|:|.||:|.::.|             .||    |.||.||:||||
  Rat   585 TLAEKEEFVHKREELERVCNPIISGLYQGAGAPGAGGFGAQAPKG----GSGSGPTIEEVD 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-2NP_524339.1 PTZ00009 1..632 CDD:240227 460/644 (71%)
HSPA1-2_6-8-like_NBD 6..382 CDD:212675 298/375 (79%)
Hspa1bNP_001316825.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53894
OrthoDB 1 1.010 - - D180577at33208
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100083
Panther 1 1.100 - - O PTHR19375
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.930

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