DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-2 and hspa12a

DIOPT Version :9

Sequence 1:NP_524339.1 Gene:Hsc70-2 / 41609 FlyBaseID:FBgn0001217 Length:633 Species:Drosophila melanogaster
Sequence 2:XP_002941887.2 Gene:hspa12a / 100489323 XenbaseID:XB-GENE-959285 Length:664 Species:Xenopus tropicalis


Alignment Length:653 Identity:146/653 - (22%)
Similarity:235/653 - (35%) Gaps:203/653 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IGIDLGTTYS-----------CVGV---WQNSKVEIIANDQG--NRTTPSYVAFNETERLIGDPA 55
            :.||.|||.|           |:.:   |:       ..|.|  |:.||:      |..|:.|..
 Frog    56 VAIDFGTTSSGYAYSFSKEPECIHIMRRWE-------GGDPGVSNQKTPT------TMLLMPDRK 107

  Fly    56 KNQVAMNAKNTVFDAKRLIGRKFDDKKIQEDLKLWPFKV-INEKGKPKIEVEFKGER-KRFAPEE 118
            .:.....|::...|        .|..:.:..|....||: ::......:|.|..... ||....|
 Frog   108 FHSFGFAARDFYHD--------LDPSESKHWLYFEKFKMKLHSSTDLTMETELTAANGKRVKALE 164

  Fly   119 ISSMVLTKMREIAEVYL----GGKVKDA----VVTVPAYFNDSQRQATKDAGSIAGL------NV 169
            |.:..|...:|.|...|    |.::..|    |:||||.:....:|..:.|...||:      ..
 Frog   165 IFAYALQYFKEQALKELSDQAGSEMDSAEVRWVITVPAIWKQPAKQFMRQAAYKAGMATPENPEQ 229

  Fly   170 LRIINEPTAA------------------ALAYGLD-----KNL---------------------- 189
            |.|..||..|                  |...|:.     |:|                      
 Frog   230 LIIALEPEGASIYCRKLRLHQMIDLSSKAAINGISPTDPAKDLARRNRQSRTFLVENVIGELWSE 294

  Fly   190 --KGERNVLIFDLGGGTFDVSV--LSIDEGSLFEVKATAGDTH--LGGE-DFDNRLVNHFAEEFK 247
              :|:|.|:: |.||||.|::|  :.:.||.|.|:...:|..:  ||.: :|:..|...|.::|.
 Frog   295 LEEGDRYVVV-DCGGGTVDLTVHQIRLPEGHLKELYKASGGPYGSLGVDYEFEKLLCKIFGDDFI 358

  Fly   248 RKHKSDIKGNARALRRLRTACERAKRTLSSSTEASLEIDALHEGIDFYSKISRARFE-------- 304
            ...|  :|..| |...|..|.|..||..:......|.|......||:|.|......|        
 Frog   359 DTFK--VKRPA-AWVDLMIAFESRKRAAAPDRTNPLNITLPFSFIDYYKKFRGHSVEHALRKSNV 420

  Fly   305 -----------ELNMD----LFRSTMQPVERALSD--AKMDKKAIHDVVLVGGSTRIPKIQKLLQ 352
                       .:|.|    ||:.|:.|:.:.|::  .|.:...:..:.||||....|.:|:.:|
 Frog   421 DFVKWSSQGMLRMNPDAMNALFKPTIDPIIQHLTNLFQKPEVAGVKFLFLVGGFAESPLLQQAVQ 485

  Fly   353 DLFGGKQLNLSINPDEAVAYGAAVQAAILTGVGSSQIQDLLLVDVAPLSLGIETAGGVMTNLVE- 416
            ..| |.|..:.|..|..:   ..::.|:|.|:..:    |:.|..:||:.|:    ||:...|| 
 Frog   486 QAF-GDQCRVIIPHDVGL---TILKGAVLFGLDPA----LIKVRRSPLTYGV----GVLNRYVEG 538

  Fly   417 ------------------------------------RNARIPCKQQQ------IFTTYSDNQNAV 439
                                                :.:..|.||.|      |:::..|:.|.:
 Frog   539 KHPPEKLLLKDGTRWCTDVFDKFILADQSVALGETVKRSYTPAKQSQLIIIIHIYSSEQDDANFI 603

  Fly   440 TIQVYEGERAMTKDNNLLGTFNLTGIPPAPRGVP---QIEVAFDLNADGILNVNAKDNSTGKSEK 501
            |      ::.:.|...|  ..:|||...||  ||   :|:..... .|..:...|.|.:|.|:.|
 Frog   604 T------DKGVRKCGTL--RLDLTGPESAP--VPSRREIQTIMQF-GDTEIKATAVDVATSKNVK 657

  Fly   502 ITI 504
            ::|
 Frog   658 VSI 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-2NP_524339.1 PTZ00009 1..632 CDD:240227 146/653 (22%)
HSPA1-2_6-8-like_NBD 6..382 CDD:212675 110/483 (23%)
hspa12aXP_002941887.2 HSPA12A_like_NBD 54..513 CDD:212685 111/485 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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