DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11670 and grass

DIOPT Version :10

Sequence 1:NP_001368950.1 Gene:CG11670 / 41608 FlyBaseID:FBgn0038114 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_651543.1 Gene:grass / 43273 FlyBaseID:FBgn0039494 Length:377 Species:Drosophila melanogaster


Alignment Length:272 Identity:76/272 - (27%)
Similarity:128/272 - (47%) Gaps:57/272 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 PHMAALGFRNENHEIDYKCGGSLISEEFVLTAAHCLTTHGTSPDI--VKIGDIKLKEWELNVAPQ 244
            |.||.|.:: :..|..:.|||::|||.::||||||:  ||...|:  :::|:.::.. |.:...|
  Fly   131 PWMALLRYQ-QFGESRFLCGGAMISERYILTAAHCV--HGLQNDLYEIRLGEHRIST-EEDCRQQ 191

  Fly   245 RRR-----------VAQIYLHPLYNASLNYHDIGLIQLNRPVEYTWFVRPVRLWPMNDIPYGKLH 298
            .|:           :.:..:|..|:|....|||.|::|||.|.:...::|:.| |:.|....|..
  Fly   192 GRKKKCAPPVVNVGIEKHLIHEKYDARHIMHDIALLKLNRSVPFQKHIKPICL-PITDELKEKAE 255

  Fly   299 TM------GYGSTGFAQPQTNILTELDLSVVPIEQCNSSLPADEGSPHGLLTSQICAHDYEKNRD 357
            .:      |:|:|.... .:::|.:.::.:.|...|:      :.....:..||:|....:. :|
  Fly   256 QISTYFVTGWGTTENGS-SSDVLLQANVPLQPRSACS------QAYRRAVPLSQLCVGGGDL-QD 312

  Fly   358 TCQGDSGGPLQLNLERRRRRHTSRKHYRYYL---------VGITSYGAY-C-RSELPGVYTRVSS 411
            :|:||||||||...:              ||         .||.|.|.. | :..|||:||.|..
  Fly   313 SCKGDSGGPLQAPAQ--------------YLGEYAPKMVEFGIVSQGVVTCGQISLPGLYTNVGE 363

  Fly   412 YIDWIASIVWPN 423
            |:.||...:..|
  Fly   364 YVQWITDTMASN 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11670NP_001368950.1 Tryp_SPc 172..419 CDD:238113 75/266 (28%)
grassNP_651543.1 CLIP 32..90 CDD:197829
Tryp_SPc 121..371 CDD:238113 75/266 (28%)
Blue background indicates that the domain is not in the aligned region.

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