DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG11670 and psh

DIOPT Version :9

Sequence 1:	NP_001368950.1	Gene:	CG11670 / 41608	FlyBaseID:	FBgn0038114	Length:	431	Species:	Drosophila melanogaster
Sequence 2:	NP_573297.1	Gene:	psh / 32832	FlyBaseID:	FBgn0030926	Length:	394	Species:	Drosophila melanogaster

Alignment Length:	261	Identity:	96/261 - (36%)
Similarity:	141/261 - (54%)	Gaps:	32/261 - (12%)

- Green bases have known domain annotations that are detailed below.

  Fly   176 VAPGQYPHMAALGFRNENHEIDYKCGGSLISEEFVLTAAHCLTTHGTSPDIVKIGDIKLKEWELN 240
            |.||.||||||:|:  .....|::||||||:..||||||||:.|...:|..|::|.:.::..:.:
  Fly   150 VDPGVYPHMAAIGY--ITFGTDFRCGGSLIASRFVLTAAHCVNTDANTPAFVRLGAVNIENPDHS 212

  Fly   241 VAPQRRRVAQIYLHPLYNASLNYHDIGLIQLNRPVEYTWFVRPVRLW------PMNDIPYGKLHT 299
            .  |...:..:.:||.|..: .|:||.:::|.|.|..|..:||..|.      |.|    .|...
  Fly   213 Y--QDIVIRSVKIHPQYVGN-KYNDIAILELERDVVETDNIRPACLHTDATDPPSN----SKFFV 270

  Fly   300 MGYGSTGF-AQPQTNILTELDLSVVPIEQCNSSLPADEGS----PHGLLTSQICAHDYEKNRDTC 359
            .|:|.... .:.::.||....|.:||::|||.|.....||    ..|::.|.:||.|.:...|.|
  Fly   271 AGWGVLNVTTRARSKILLRAGLELVPLDQCNISYAEQPGSIRLLKQGVIDSLLCAIDQKLIADAC 335

  Fly   360 QGDSGGPL--QLNLERRRRRHTSRKHYRYYLVGITSYGAYCRSELPGVYTRVSSYIDWIASIVWP 422
            :|||||||  :||:|          ...|.::|:.|.|..|.:..||:|||||||:|:|..||||
  Fly   336 KGDSGGPLIHELNVE----------DGMYTIMGVISSGFGCATVTPGLYTRVSSYLDFIEGIVWP 390

  Fly   423 N 423
            :
  Fly   391 D 391

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG11670	NP_001368950.1	Tryp_SPc	172..419	CDD:238113	92/255 (36%)
psh	NP_573297.1	CLIP	30..79	CDD:197829
		Tryp_SPc	143..384	CDD:214473	91/252 (36%)
		Tryp_SPc	144..387	CDD:238113	92/255 (36%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	70	1.000	Domainoid score	I6224
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D105391at6960
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.920