DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11670 and CG30287

DIOPT Version :10

Sequence 1:NP_001368950.1 Gene:CG11670 / 41608 FlyBaseID:FBgn0038114 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_726083.1 Gene:CG30287 / 246530 FlyBaseID:FBgn0050287 Length:284 Species:Drosophila melanogaster


Alignment Length:248 Identity:71/248 - (28%)
Similarity:107/248 - (43%) Gaps:66/248 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 KCGGSLISEEFVLTAAHCLTTHGTSPDIVKIGDIKLKEWELNVA-----------PQRRRVAQIY 252
            |||||||:..:||||||| .:...|...|::||     :::|.|           |:...|.:.|
  Fly    66 KCGGSLITPRYVLTAAHC-KSETKSQLTVRLGD-----YDVNQAVDCSSYGCIPRPREINVTRTY 124

  Fly   253 LHPLYNASLNYHDIGLIQLNRPVEYTWFVRPVRL------WPMNDIPYGKLHTMGYGSTGFAQPQ 311
            : |.:..:...:||.|::|...|:|...:|.:.|      |..|.:.    :.:.:.:||:.:.:
  Fly   125 V-PSHYTNFRKNDIALLRLETTVQYGDNIRSICLLMGDYTWSSNILK----NLVKFNTTGWGRTE 184

  Fly   312 TNILTELDLSVVPIEQCNSSLPADEGSPHGLLTSQICAHDYEKNRD------------TCQGDSG 364
            :.|              ||.:.......|..|:  .||..:.|..|            |||||||
  Fly   185 SRI--------------NSPVLQQASLTHHHLS--YCAQVFGKQLDKSHICVASSTGSTCQGDSG 233

  Fly   365 GPLQLNLERRRRRHTSRKHYRYYLVGITSYGA-YCRSELPGVYTRVSSYIDWI 416
            |||...:.....|       |..|.|:.|||| :|..  |.|||.|..:.:||
  Fly   234 GPLTARVRIGSER-------RVILFGVVSYGAVHCFG--PTVYTNVIHFANWI 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11670NP_001368950.1 Tryp_SPc 172..419 CDD:238113 71/248 (29%)
CG30287NP_726083.1 Tryp_SPc 42..280 CDD:238113 71/248 (29%)

Return to query results.
Submit another query.