DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11670 and svh-1

DIOPT Version :10

Sequence 1:NP_001368950.1 Gene:CG11670 / 41608 FlyBaseID:FBgn0038114 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:255 Identity:73/255 - (28%)
Similarity:124/255 - (48%) Gaps:41/255 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 PGQYPHMAALGFRNENHEIDYKCGGSLISEEFVLTAAHCLTTHGTSPDIVKIGDIKLKEWELNVA 242
            ||.:|..|||  ||:..:. :.||.|::.:..::|||||.    ...:.|...::.:.:|:.|..
 Worm   721 PGAFPWTAAL--RNKATKA-HHCGASILDKTHLITAAHCF----EEDERVSSYEVVVGDWDNNQT 778

  Fly   243 PQRRRV---AQIYLHPLYNASLNYHDIGLIQLNRP-VEYTWFVRPVRLWPMNDIPY--GKLHTM- 300
            ....::   .:|:.:|||. .:..|||.::::..| :|:..:.:|:.| |..|..|  |:...: 
 Worm   779 DGNEQIFYLQRIHFYPLYK-DIFSHDIAILEIPYPGIEFNEYAQPICL-PSKDFVYTPGRQCVVS 841

  Fly   301 GYGSTGFAQPQTNILTELDLSVVPI----EQCNSSLPADEGSPHGLLTSQICAHDYEKNRDTCQG 361
            |:||.|....:     .|..:::||    :..|||......|     .|..||...|...|:|||
 Worm   842 GWGSMGLRYAE-----RLQAALIPIINRFDCVNSSQIYSSMS-----RSAFCAGYLEGGIDSCQG 896

  Fly   362 DSGGPLQLNLERRRRRHTSRKHYRYYLVGITSYGAYC-RSELPGVYTRVSSYIDWIASIV 420
            |||||....          |:...:.|.|:.|:|..| :.:.||:||.|:.|:.||::|:
 Worm   897 DSGGPFACR----------REDGAFVLAGVISWGDGCAQKKQPGIYTMVAPYLSWISAII 946

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11670NP_001368950.1 Tryp_SPc 172..419 CDD:238113 72/252 (29%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SR 599..681 CDD:214555
Tryp_SPc 713..945 CDD:238113 72/252 (29%)
Blue background indicates that the domain is not in the aligned region.

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