DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG11670 and svh-1

DIOPT Version :9

Sequence 1:	NP_001368950.1	Gene:	CG11670 / 41608	FlyBaseID:	FBgn0038114	Length:	431	Species:	Drosophila melanogaster
Sequence 2:	NP_501379.2	Gene:	svh-1 / 182375	WormBaseID:	WBGene00006620	Length:	951	Species:	Caenorhabditis elegans

Alignment Length:	255	Identity:	73/255 - (28%)
Similarity:	124/255 - (48%)	Gaps:	41/255 - (16%)

- Green bases have known domain annotations that are detailed below.

  Fly   178 PGQYPHMAALGFRNENHEIDYKCGGSLISEEFVLTAAHCLTTHGTSPDIVKIGDIKLKEWELNVA 242
            ||.:|..|||  ||:..:. :.||.|::.:..::|||||.    ...:.|...::.:.:|:.|..
Worm   721 PGAFPWTAAL--RNKATKA-HHCGASILDKTHLITAAHCF----EEDERVSSYEVVVGDWDNNQT 778

  Fly   243 PQRRRV---AQIYLHPLYNASLNYHDIGLIQLNRP-VEYTWFVRPVRLWPMNDIPY--GKLHTM- 300
            ....::   .:|:.:|||. .:..|||.::::..| :|:..:.:|:.| |..|..|  |:...:
Worm   779 DGNEQIFYLQRIHFYPLYK-DIFSHDIAILEIPYPGIEFNEYAQPICL-PSKDFVYTPGRQCVVS 841

  Fly   301 GYGSTGFAQPQTNILTELDLSVVPI----EQCNSSLPADEGSPHGLLTSQICAHDYEKNRDTCQG 361
            |:||.|....:     .|..:::||    :..|||......|     .|..||...|...|:|||
Worm   842 GWGSMGLRYAE-----RLQAALIPIINRFDCVNSSQIYSSMS-----RSAFCAGYLEGGIDSCQG 896

  Fly   362 DSGGPLQLNLERRRRRHTSRKHYRYYLVGITSYGAYC-RSELPGVYTRVSSYIDWIASIV 420
            |||||....          |:...:.|.|:.|:|..| :.:.||:||.|:.|:.||::|:
Worm   897 DSGGPFACR----------REDGAFVLAGVISWGDGCAQKKQPGIYTMVAPYLSWISAII 946

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG11670	NP_001368950.1	Tryp_SPc	172..419	CDD:238113	72/252 (29%)
svh-1	NP_501379.2	KR	227..306	CDD:214527
		LDLa	320..355	CDD:238060
		PAN_AP_HGF	373..434	CDD:238532
		LDLa	558..590	CDD:197566
		SRCR_2	599..681	CDD:382996
		Tryp_SPc	713..945	CDD:238113	72/252 (29%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR24258
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.010