DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11670 and Gzmb

DIOPT Version :10

Sequence 1:NP_001368950.1 Gene:CG11670 / 41608 FlyBaseID:FBgn0038114 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_612526.2 Gene:Gzmb / 171528 RGDID:620018 Length:248 Species:Rattus norvegicus


Alignment Length:246 Identity:78/246 - (31%)
Similarity:117/246 - (47%) Gaps:40/246 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 PGQYPHMAALGFRNENHEIDYKCGGSLISEEFVLTAAHCLTTHGTSPDIVKIGDIKLKEWE--LN 240
            |...|:||.|...:| :....||||.||.|:||||||||    ..|...|.:|...:||.|  ..
  Rat    29 PHSRPYMAYLQIMDE-YSGSKKCGGFLIREDFVLTAAHC----SGSKINVTLGAHNIKEQEKMQQ 88

  Fly   241 VAPQRRRVAQIYLHPLYNASLNYHDIGLIQLNRPVEYTWFVRPVRLWPMNDI---PYGKLHTMGY 302
            :.|    |.:|..||.||:....:||.|::|....:.:..|:|:.| |..::   |....:..|:
  Rat    89 IIP----VVKIIPHPAYNSKTISNDIMLLKLKSKAKRSSAVKPLNL-PRRNVKVKPGDVCYVAGW 148

  Fly   303 GSTGFAQPQTNILTELDLSVVPIEQCNSSLP--ADEGSPHGLLTSQICAHDYEKNRDTCQGDSGG 365
            |..|.....::.|.|::|:|...::|.|.|.  .|:       .::|||.|.:..|.:.:|||||
  Rat   149 GKLGPMGKYSDTLQEVELTVQEDQKCESYLKNYFDK-------ANEICAGDPKIKRASFRGDSGG 206

  Fly   366 PLQLNLERRRRRHTSRKHYRYYLVGITSYGAYCRSELPGVYTRVSSYIDWI 416
            ||..               :....||.|||....| .|..:|:||:::.||
  Rat   207 PLVC---------------KKVAAGIVSYGQNDGS-TPRAFTKVSTFLSWI 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11670NP_001368950.1 Tryp_SPc 172..419 CDD:238113 78/246 (32%)
GzmbNP_612526.2 Tryp_SPc 21..244 CDD:238113 78/246 (32%)

Return to query results.
Submit another query.