DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and Tmprss5

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001346389.1 Gene:Tmprss5 / 80893 MGIID:1933407 Length:455 Species:Mus musculus


Alignment Length:306 Identity:87/306 - (28%)
Similarity:134/306 - (43%) Gaps:61/306 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 PVICCPLADKHVLAQRISATKCQEYNAAARRLHLTDTGRTFSGKQCVPSVPLIVGGTPTRHGLFP 198
            |...||       :.||.:.||.|..|.                   |....||||.....|.:|
Mouse   192 PSANCP-------SGRIVSLKCSECGAR-------------------P
LASRIVGGQAVASGRWP 230

  Fly   199 HMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHC--------ATSGSKPPDMVRLGARQLN 255
            ..|::  ..||       :..||.::::..:|:|||||        .:|......:|..||.:.:
Mouse   231 WQASV--MLGS-------RHTCGASVLAPHWVVTAAHCMYSFRLSRLSSWRVHAGLVSHGAVRQH 286

  Fly   256 ETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPELQIP---TVVA 317
            :.:..::      |:.||.|.:..:.:|:|||:|...:.||:.|...|| ...|...|   ....
Mouse   287 QGTMVEK------IIPHPLYSAQNHDYDVALLQLRTPINFSDTVGAVCL-PAKEQHFPWGSQCWV 344

  Fly   318 AGWGRTEFLGA-KSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYLPGGRDTCQGDS 381
            :|||.|:.... .|:.|:...:.::....|.........|...::    |||||.|..|.|||||
Mouse   345 SGWGHTDPSHTHSSDTLQDTMVPLLSTYLCNSSCMYSGALTHRML----CAGYLDGRADACQGDS 405

  Fly   382 GGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWI 427
            |||:  :.|..: ...:||:.|:|:.||.||.||||.::..:||||
Mouse   406 GGPL--VCPSGD-TWHLVGVVSWGRGCAEPNRPGVYAKVAEFLDWI 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829 1/4 (25%)
Tryp_SPc 186..430 CDD:238113 77/254 (30%)
Tmprss5NP_001346389.1 SRCR_2 116..213 CDD:464747 9/46 (20%)
Tryp_SPc 217..448 CDD:214473 75/253 (30%)

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