DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and tmprss4a

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_005157547.2 Gene:tmprss4a / 777630 ZFINID:ZDB-GENE-061103-631 Length:458 Species:Danio rerio


Alignment Length:469 Identity:120/469 - (25%)
Similarity:181/469 - (38%) Gaps:100/469 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 IILWSLIVHLQLTCLHLILQTPNLEALDALEIINYQTTKYTI-PEVWKEQPVATIGEDVDD-QDT 64
            ||:..|:|.:.|..|          |:.|..|.....:||.. .:.||..|:..:.:..:| .:.
Zfish    45 IIITVLMVVVVLAIL----------AVAAFLIKQLIDSKYFFCTKSWKFIPLEKVCDGKNDCSEA 99

  Fly    65 EDEESYLKFGDDAEVRTSVSEGLHEGAFCRRSFDGRSGYCILAYQCLHVIREYR-VHGTRIDICT 128
            |||.:                       |...|...:.:.:..|...:|::... ...|...:|:
Zfish   100 EDESA-----------------------CVTMFKPNTTFPLRLYSANNVLQVLSPSDNTWKSVCS 141

  Fly   129 ------HRNNV---------PVICC----PL-ADKHVLAQRISATKCQEYNAAARRLHLTDTGRT 173
                  |....         ||...    || :|..:....:..||.|.:.:|.....:..||..
Zfish   142 ESFTQQHAETACQLLGYSVSPVFSSIAVGPLPSDLKISFCMVGTTKPQTFQSAVSDRKVCSTGTV 206

  Fly   174 FSGKQCVPSVPL------IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLT 232
            .| ..|.....|      ||||.......:|...:|   |.||...      |||:||:..:|:|
Zfish   207 IS-LSCSADCGLSRNQDRIVGGKDADIANWPWQVSL---QYSGQHT------CGGSLVTPNWVVT 261

  Fly   233 AAHCAT-SGSKPPD--MVRLGARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVK 294
            ||||.. .|.|...  .|..|...|:.|.::.    :..|:::..|:.:....||.::||...:.
Zfish   262 AAHCFNGDGRKALSRWTVVSGITYLSSTPSSY----VKEIIVNSNYKPAESDFDITMIKLQSPIT 322

  Fly   295 FSEQVRPACLWQLPELQI-----PTVVAAGWGR-TEFLGAKSNALRQVDLDVVPQMTCKQ--IYR 351
            .||..||.|   ||...:     ..:|..|||. .|..|:.|:.|::..:.|:....|..  :|.
Zfish   323 LSESRRPVC---LPPQNLGLKGGDGLVVTGWGHMAEKGGSLSSMLQKAQIQVIDSAQCSSPTVYG 384

  Fly   352 KERRLPRGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGV 416
            .      .|.....|||.:.||.|.||||||||:..|...:    .:||:.|:|..||.|..|||
Zfish   385 S------SITSRMICAGVMAGGVDACQGDSGGPLVHLADRW----VLVGVVSWGVGCARPGFPGV 439

  Fly   417 YTRLYSYLDWIEKI 430
            ||.:...|||...:
Zfish   440 YTNVDQMLDWAHSV 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829 9/65 (14%)
Tryp_SPc 186..430 CDD:238113 81/254 (32%)
tmprss4aXP_005157547.2 None

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