DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and Prss56

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_006529921.1 Gene:Prss56 / 69453 MGIID:1916703 Length:605 Species:Mus musculus


Alignment Length:332 Identity:99/332 - (29%)
Similarity:142/332 - (42%) Gaps:77/332 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 QRISATKCQEYNAAAR---------------RLHLTDTGRTFSGKQCVPSVPL------------ 185
            |.:||...|...||.|               |||....|   .|:. .|..||            
Mouse    35 QVLSAQGTQALQAAQRSAQWAIKRVLMEIQHRLHECQVG---PGRP-RPQAPLLQDPPEPVQCGE 95

  Fly   186 --------------IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWG----CGGALVSELYVLT 232
                          ||||:....|.:|.:..|             :.|    |||.||:..:|||
Mouse    96 RHQGVANTTRAHGRIVGGSTAPSGAWPWLVRL-------------QLGGLPLCGGVLVAASWVLT 147

  Fly   233 AAHCATSGSKPPDMVRLGARQLNETSATQQ--DIKILIIVLHPKYRSSAYYHDIALLKLTRRVKF 295
            ||||....|..    .|....|.|....:|  ::::..|:.|||:....:::|:||::|...|..
Mouse   148 AAHCFAGASNE----LLWTVMLAEGPQGEQAEEVQVNRILPHPKFDPQTFHNDLALVQLWTPVSP 208

  Fly   296 SEQVRPACLWQ---LPELQIPTVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLP 357
            ....||.||.|   .|....|..: ||||.....|.:|.|:|:..:.::...||:::.....| |
Mouse   209 EGPARPICLPQGSREPPAGTPCAI-AGWGALFEDGPESEAVREARVPLLSADTCQKVLGPGLR-P 271

  Fly   358 RGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYS 422
            ..::    |||||.||.|:||||||||:....|.......:.|:||:|..|..|..||||||:..
Mouse   272 STML----CAGYLAGGIDSCQGDSGGPLTCSEPGPRPREVLFGVTSWGDGCGEPGKPGVYTRVTV 332

  Fly   423 YLDWIEK 429
            :.||:::
Mouse   333 FKDWLQE 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 84/253 (33%)
Prss56XP_006529921.1 Tryp_SPc 109..336 CDD:214473 82/249 (33%)
Blue background indicates that the domain is not in the aligned region.

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