DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and prss1

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_571783.2 Gene:prss1 / 65223 ZFINID:ZDB-GENE-010131-7 Length:247 Species:Danio rerio


Alignment Length:244 Identity:79/244 - (32%)
Similarity:124/244 - (50%) Gaps:30/244 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 IVGGTP-TRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRL 249
            ||||.. |::|: |:..:|    .||..      .|||:|:|.|:|::||||..|..:    |||
Zfish    25 IVGGYECTKNGV-PYQVSL----NSGYH------FCGGSLISNLWVVSAAHCYKSRVQ----VRL 74

  Fly   250 GARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPELQIPT 314
            |...::.|..|:|.|....::.||.|.|:...:|:.|:||:...:.:..|:...|.........:
Zfish    75 GEHNIDVTEGTEQFINSEKVIRHPSYNSNTLDNDVMLIKLSSSAQINSYVKTVSLPSSCASSGTS 139

  Fly   315 VVAAGWGRTEFLGAK-SNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYLPGGRDTCQ 378
            .:.:|||.....|:. .:.|..::..::...||:..|      |..|....||||::.||:|:||
Zfish   140 CLISGWGNMSASGSNYPSRLMCLNAPILSDSTCRNAY------PGQISSNMFCAGFMEGGKDSCQ 198

  Fly   379 GDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWI 427
            ||||||:       .|...:.||.|:|..||..|.||||.::.::..||
Zfish   199 GDSGGPV-------VCNNQLQGIVSWGYGCAQRNKPGVYAKVCNFTTWI 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 79/244 (32%)
prss1NP_571783.2 Tryp_SPc 25..243 CDD:238113 79/244 (32%)
Blue background indicates that the domain is not in the aligned region.

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