DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and zgc:123217

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001032480.2 Gene:zgc:123217 / 641414 ZFINID:ZDB-GENE-051113-188 Length:326 Species:Danio rerio


Alignment Length:264 Identity:84/264 - (31%)
Similarity:119/264 - (45%) Gaps:50/264 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRLG 250
            |||||....|.:|      |.......::.|   |||.|:...:|:|||||..:.:.....:.||
Zfish    37 IVGGTDAPAGSWP------WQVSIHYNNRHI---CGGTLIHSQWVMTAAHCIINTNINVWTLYLG 92

  Fly   251 ARQLNETS-ATQQDIKILI--IVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACL-------- 304
             ||...|| |...::|:.:  |::||.:.:|...:||:|:||::.|.||:.:||.||        
Zfish    93 -RQTQSTSVANPNEVKVGLQSIIVHPSFNNSLLNNDISLMKLSQPVNFSQYIRPICLAANNSIFY 156

  Fly   305 -----WQLPELQIPTVVAAGW---GRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGII 361
                 |           |.||   |:.:.|.| ...|:||.:.||....|...|.......  |.
Zfish   157 NGTSCW-----------ATGWGNIGKDQALPA-PQTLQQVQIPVVANSLCSTEYESVNNAT--IT 207

  Fly   362 EGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKF--CAAPNAPGVYTRLYSYL 424
            ....|||  ...:.|||||||||...   :...|....||||:|..  ||....|.||:|:..:.
Zfish   208 PQMICAG--KANKGTCQGDSGGPFQC---KQGSVWIQAGITSYGTSAGCAVGAYPDVYSRVSEFQ 267

  Fly   425 DWIE 428
            .||:
Zfish   268 SWIK 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 84/264 (32%)
zgc:123217NP_001032480.2 Tryp_SPc 37..273 CDD:238113 84/264 (32%)
Blue background indicates that the domain is not in the aligned region.

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