DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snk and CG18735

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_652645.1 Gene:CG18735 / 59137 FlyBaseID:FBgn0042098 Length:364 Species:Drosophila melanogaster


Alignment Length:249 Identity:87/249 - (34%)
Similarity:125/249 - (50%) Gaps:27/249 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWG---CGGALVSELYVLTAAHCATSGSKPPDMV 247
            ||||..|....:|.|..|.|            :|   ||.:||::.|.||||||..........|
  Fly    83 IVGGQETEVHEYPWMIMLMW------------FGNFYCGASLVNDQYALTAAHCVNGFYHRLITV 135

  Fly   248 RLGARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPELQI 312
            ||......::.....|.::..:::||||.:..:..||||::....|:....:.|.|:....|...
  Fly   136 RLLEHNRQDSHVKIVDRRVSRVLIHPKYSTRNFDSDIALIRFNEPVRLGIDMHPVCMPTPSENYA 200

  Fly   313 -PTVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYL-PGGRD 375
             .|.|..|||.....|..|:.|::|::.::.|..|:.....|.:    |.:...||||: .||:|
  Fly   201 GQTAVVTGWGALSEGGPISDTLQEVEVPILSQEECRNSNYGESK----ITDNMICAGYVEQGGKD 261

  Fly   376 TCQGDSGGPIHAL--LPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWI 427
            :||||||||:|.|  ...|.    :.||.|:|:.||.|||||||||:.|:.|||
  Fly   262 SCQGDSGGPMHVLGSGDAYQ----LAGIVSWGEGCAKPNAPGVYTRVGSFNDWI 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 87/249 (35%)
CG18735NP_652645.1 Tryp_SPc 83..314 CDD:238113 87/249 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.