DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and CG34458

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001097340.1 Gene:CG34458 / 5740868 FlyBaseID:FBgn0085487 Length:257 Species:Drosophila melanogaster


Alignment Length:255 Identity:71/255 - (27%)
Similarity:116/255 - (45%) Gaps:40/255 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRL- 249
            |:||.....|.|||..:|   |.:|      :..|||:|:|:..::||||| |.|..|..|..: 
  Fly    32 IIGGQFAAPGQFPHQVSL---QLNG------RHHCGGSLISDTMIVTAAHC-TMGQNPGQMKAIV 86

  Fly   250 GARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPELQIPT 314
            |...|  ::...|...|...::||:|...:...|::|:||:..|.....|:...|..........
  Fly    87 GTNDL--SAGNGQTFNIAQFIIHPRYNPQSQDFDMSLIKLSSPVPMGGAVQTIQLADSDSNYAAD 149

  Fly   315 VVA--AGWGRTEFLGAKSNALRQVDLDVVPQMTCKQI------YRKERRLPRGIIEGQFCAGYLP 371
            .:|  :|:|          |:.| :|.:..::...|:      |...:.:| |:.:...|||:..
  Fly   150 TMAMISGFG----------AINQ-NLQLPNRLKFAQVQLWSRDYCNSQNIP-GLTDRMVCAGHPS 202

  Fly   372 GGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWIEKIA 431
            |...:||||||||:       .....:.|:.|:|..|.|...|.:||.:.:...||::.|
  Fly   203 GQVSSCQGDSGGPL-------TVDGKLFGVVSWGFGCGAKGRPAMYTYVGALRSWIKQNA 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 70/252 (28%)
CG34458NP_001097340.1 Tryp_SPc 32..254 CDD:238113 70/252 (28%)
Blue background indicates that the domain is not in the aligned region.

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