DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and CG34290

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001097899.2 Gene:CG34290 / 5740609 FlyBaseID:FBgn0085319 Length:282 Species:Drosophila melanogaster


Alignment Length:275 Identity:70/275 - (25%)
Similarity:114/275 - (41%) Gaps:56/275 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 SVPLIVG------GTPTRHGLFPHMAALGWTQGSGSKDQDI-----------KWGCGGALVSELY 229
            :||::.|      |:.|  ..:|.|.:|          ||:           :..|||:|:|:.:
  Fly    31 AVPIVGGRIVSTVGSST--SKYPFMVSL----------QDVITRNTTNGVSYQHFCGGSLISDRW 83

  Fly   230 VLTAAHCATSGSKPPDMVRLGARQLNETSATQ----QDIKILIIVLHPKYRSSAYYHDIALLKLT 290
            :|:||||....:.......:|...:......|    :.::.:.      ::.|.:.:|||||.:.
  Fly    84 ILSAAHCVWRKNIHYIAAFIGYENIENIGQLQPYGLESVEYIY------FQPSNFRNDIALLYMK 142

  Fly   291 RRV--KFSEQVRPACLWQLPEL-----QIPTVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQ 348
            ||.  .|...::.|   |||..     |..:....|:|.|...|.....|.:.::.|:....|:.
  Fly   143 RRYWSDFGNGLQYA---QLPPHGMKPDQNESCRIIGYGATHHAGPCQKRLFEAEVRVIDNQKCRD 204

  Fly   349 IYRKERRLPRGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNA 413
            |.........|  ....||  |...:|:||||||||   |:..|....::.|:.|.|..|..|..
  Fly   205 IIGHIWAPQNG--ANTVCA--LGNNQDSCQGDSGGP---LICTYGGKDYIYGLVSHGLTCGIPGM 262

  Fly   414 PGVYTRLYSYLDWIE 428
            |.:||....|.||::
  Fly   263 PSIYTVTRPYYDWVQ 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 68/271 (25%)
CG34290NP_001097899.2 Tryp_SPc 34..277 CDD:238113 68/270 (25%)
Blue background indicates that the domain is not in the aligned region.

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