DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and prss60.2

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001099071.1 Gene:prss60.2 / 541408 ZFINID:ZDB-GENE-050320-109 Length:328 Species:Danio rerio


Alignment Length:271 Identity:92/271 - (33%)
Similarity:127/271 - (46%) Gaps:54/271 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWG---CGGALVSELYVLTAAHCATSGSKPPDMV 247
            ||||.....|.:|...:|          |..::|   |||:|:|..:|||||||....|:...:|
Zfish    34 IVGGVNAPEGSWPWQVSL----------QSPRYGGHFCGGSLISSEWVLTAAHCLPGVSESSLVV 88

  Fly   248 RLGARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACL-------- 304
            .||.|.....:..:....:..|::|..|.|:...:|||||:|:..|.|::.:||.||        
Zfish    89 YLGRRTQQGVNTHETSRNVAKIIVHSSYNSNTNDNDIALLRLSSAVTFNDYIRPVCLAAQNSVYS 153

  Fly   305 -----WQLPELQIPTVVAAGWGRTEFLGAKSNA---LRQVDLDVVPQMTCKQIYRKERRLPRG-I 360
                 |           ..|||..: .|....|   |::..:.||....|      ..:|..| :
Zfish   154 AGTSSW-----------ITGWGDVQ-AGVNLPAPGILQETMIPVVANDRC------NAQLGSGTV 200

  Fly   361 IEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFV-VGITSFGKFCAAPNAPGVYTRLYSYL 424
            .....|||...||:||||||||||:...|    |..:: .||||:|..||.||:||||||:..|.
Zfish   201 TNNMICAGLAKGGKDTCQGDSGGPMVTRL----CTVWIQAGITSWGYGCADPNSPGVYTRVSQYQ 261

  Fly   425 DWI-EKIAFKQ 434
            .|| .||:..|
Zfish   262 SWISSKISQNQ 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 89/265 (34%)
prss60.2NP_001099071.1 Tryp_SPc 34..267 CDD:238113 89/264 (34%)
Somatomedin_B 296..326 CDD:470596
Blue background indicates that the domain is not in the aligned region.

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