DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and Prss44

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001388157.1 Gene:Prss44 / 501060 RGDID:1560940 Length:373 Species:Rattus norvegicus


Alignment Length:248 Identity:87/248 - (35%)
Similarity:119/248 - (47%) Gaps:21/248 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRLG 250
            ||||.|.....:|      |........|.|   |||:|:|:.:|:|||||..  .....:|.:|
  Rat   113 IVGGKPAPIRKWP------WQVSLQVHKQHI---CGGSLISKWWVMTAAHCVY--GHLDYVVSMG 166

  Fly   251 ARQLNETSATQQDIKILIIVLHPKYR-SSAYYHDIALLKLTRRVKFSEQVRPACLWQLPELQIPT 314
            ...|  .|:....|.:..|::|..|. .....|||||:.|...|.:|..::|.|:.:...|..|.
  Rat   167 EADL--WSSMSVKIPVQDIIVHQDYSVMRTIVHDIALVLLAFPVNYSVNIQPVCIPEKSFLVQPG 229

  Fly   315 VV--AAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRK-ERRLPRGIIEGQFCAGYLPGGRDT 376
            .:  ..|||:|...|..|..||:|||.::....|.||.:. ..|:...:.||..| ||...|.|.
  Rat   230 TLCWVTGWGKTIERGRSSRVLREVDLSIIRHERCNQILKDITGRIFTLVQEGGVC-GYNKKGGDA 293

  Fly   377 CQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWIEK 429
            ||||||||   ::.|:|.....|||.|:|..|.....||:||.:..|.|||.|
  Rat   294 CQGDSGGP---MVCEFNKTWVQVGIVSWGLGCGRIGYPGIYTEVSYYRDWIIK 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 87/248 (35%)
Prss44NP_001388157.1 Tryp_SPc 113..341 CDD:238113 84/244 (34%)
Blue background indicates that the domain is not in the aligned region.

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