DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and cela1.2

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001011493.1 Gene:cela1.2 / 496993 XenbaseID:XB-GENE-5739190 Length:265 Species:Xenopus tropicalis


Alignment Length:273 Identity:84/273 - (30%)
Similarity:119/273 - (43%) Gaps:49/273 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 QCVPSVPLI------VGGTPTRHGLFPHMAALGWTQGSGSKDQDIKW--GCGGALVSELYVLTAA 234
            ||...:.||      :|||..:...:|...:|.:..| ||      |  .|||:|:....|||||
 Frog    15 QCSNDIRLIEDHERVIGGTEVQRNSWPWQVSLQYLSG-GS------WYHTCGGSLIRANRVLTAA 72

  Fly   235 HCATSGSKPPDMVRLGARQLNETSATQQDIKILIIVLHPKYRSS--AYYHDIALLKLTRRVKFSE 297
            ||......  ..|.:|...:.:...|:|.|.:..||.|..:..:  |..:||::|.|:.....:.
 Frog    73 HCVDRAVS--YRVVVGDHNIYQNDGTEQYISVSRIVKHANWNPNNIAAGYDISILHLSSSATLNS 135

  Fly   298 QVRPACLWQLPELQIP-----TVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLP 357
            .|:   |.|||...:.     ..|..|||:|...|..::.|:|..|.|:...||..         
 Frog   136 YVK---LAQLPADNVVLAHNYNCVVTGWGKTSNNGNLASVLQQAPLPVIAHSTCSS--------- 188

  Fly   358 RGIIEG------QFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSF--GKFCAAPNAP 414
             |...|      ..|||. .|.|..||||||||::.   ..|.|..|.|:|||  ...|:....|
 Frog   189 -GSYWGSTVKSTMVCAGG-DGVRSGCQGDSGGPLNC---PVNGVYQVHGVTSFVSSSGCSTYLKP 248

  Fly   415 GVYTRLYSYLDWI 427
            .|:||:.:|:.||
 Frog   249 TVFTRVSAYIGWI 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 81/265 (31%)
cela1.2NP_001011493.1 Tryp_SPc 29..264 CDD:238113 80/259 (31%)
Blue background indicates that the domain is not in the aligned region.

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