DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and ctrc

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001008077.1 Gene:ctrc / 493439 XenbaseID:XB-GENE-5790348 Length:268 Species:Xenopus tropicalis


Alignment Length:278 Identity:96/278 - (34%)
Similarity:123/278 - (44%) Gaps:62/278 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 PSVPLIVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWG--CGGALVSELYVLTAAHCATSGSKP 243
            |.|..:|||.......:|...:|.:...||:      ||  |||.|:||.:|||||||.:||.  
 Frog    24 PKVTRVVGGEDVVPHSWPWQISLQYQGTSGA------WGHTCGGTLISEQWVLTAAHCISSGR-- 80

  Fly   244 PDMVRLGARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLP 308
            ...|.||...|.:..|....|....|::|.|:.|....:||||:||::....||.::|||     
 Frog    81 VYRVFLGKHSLQQDEAEAVAITPEKIIVHEKWNSLFIINDIALIKLSQPAPLSEAIQPAC----- 140

  Fly   309 ELQIPTVVA----------AGWGRTEFLGAKSNALRQVDLDVVPQMTC-------KQIYRKERRL 356
               ||:..|          .||||....|..::.|:|..|.||...||       .|:...    
 Frog   141 ---IPSSGAILANDFPCFVTGWGRLYTNGPIADNLQQALLPVVDHATCTLRDWWGSQVQTT---- 198

  Fly   357 PRGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAF-----VVGITSFGK--FCAAPNAP 414
                   ..|||. .|....|.||||||:       ||.|.     |.||.|||.  .|.....|
 Frog   199 -------MVCAGG-DGIVSGCNGDSGGPL-------NCQAAGGAWEVHGIVSFGSGISCNYAKKP 248

  Fly   415 GVYTRLYSYLDWI-EKIA 431
            .|:||:.:|.||| ||||
 Frog   249 TVFTRVSAYNDWISEKIA 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 91/270 (34%)
ctrcNP_001008077.1 Tryp_SPc 29..264 CDD:238113 90/269 (33%)
Blue background indicates that the domain is not in the aligned region.

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