DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and epsilonTry

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_525112.1 Gene:epsilonTry / 49080 FlyBaseID:FBgn0010425 Length:256 Species:Drosophila melanogaster


Alignment Length:249 Identity:73/249 - (29%)
Similarity:111/249 - (44%) Gaps:29/249 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRLG 250
            ||||..|.....|:..:|   |..||.      .|||::.|...|:|||||..|.......:|:|
  Fly    31 IVGGYETSIDAHPYQVSL---QRYGSH------FCGGSIYSHDIVITAAHCLQSIEAKDLKIRVG 86

  Fly   251 ARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPELQIPTV 315
            :.......:..   .:.....|..|.|....:|||::::...:.|...:|...:......:..|.
  Fly    87 STYWRSGGSVH---SVRSFRNHEGYNSRTMVNDIAIIRIESDLSFRSSIREIRIADSNPREGATA 148

  Fly   316 VAAGWGRTEFLGAK-SNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYLPGGRDTCQG 379
            |.:|||.||..|:. .:.|..|||:::....|:.   .|....:.|.:...|| |.| .:|.|||
  Fly   149 VVSGWGTTESGGSTIPDHLLAVDLEIIDVSRCRS---DEFGYGKKIKDTMLCA-YAP-HKDACQG 208

  Fly   380 DSGGPIHALLPEYNCVA--FVVGITSFGKFCAAPNAPGVYTRLYSYLDWIEKIA 431
            |||||:         |:  .:||:.|:|..|.....||||..:..:.:|||:.|
  Fly   209 DSGGPL---------VSGDRLVGVVSWGYGCGDVRYPGVYADVAHFHEWIERTA 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 72/246 (29%)
epsilonTryNP_525112.1 Tryp_SPc 30..249 CDD:214473 69/243 (28%)
Blue background indicates that the domain is not in the aligned region.

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