DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and LOC4578454

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_061513049.1 Gene:LOC4578454 / 4578454 VectorBaseID:AGAMI1_013478 Length:371 Species:Anopheles gambiae


Alignment Length:253 Identity:92/253 - (36%)
Similarity:141/253 - (55%) Gaps:15/253 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 GTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSK--PPDMVRLGA 251
            |.|::.|.|..:||:|||:..|:    :.|.|||:|:...::||||||......  |||::|:|.
Mosquito    56 GNPSKPGDFSAIAAIGWTKPGGT----VNWNCGGSLIWANFILTAAHCTKDRDTLLPPDVIRIGD 116

  Fly   252 RQL--NETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPELQIPT 314
            ..|  :...|..|:..|:.::.||.|.:|:.::|||||.|..:|....:|.|.|||....:....
Mosquito   117 LNLYDDREDALVQERTIIRVIRHPLYNTSSVFYDIALLMLNEKVNIYFEVMPTCLWLDDNIPFSK 181

  Fly   315 VVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYLPGGRDTCQG 379
            |.|||||.:.|...|:|.|.:.:|.::....|:..|.:...:..|:::.|.||  .....|||.|
Mosquito   182 VEAAGWGTSGFGYGKTNILIKAELKLMANKDCESYYSQVASVKNGLMDHQLCA--WDKVMDTCPG 244

  Fly   380 DSGGPI-HALL-PEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWIEKIAFKQH 435
            |||||: |.|: .:|. |.|:||:||||..| ..:.||||.::..:..||.: ..:||
Mosquito   245 DSGGPLQHKLIFGDYK-VPFLVGVTSFGLSC-GNSQPGVYVKVSKFGSWIVE-TLQQH 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 90/246 (37%)
LOC4578454XP_061513049.1 None
Blue background indicates that the domain is not in the aligned region.

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