DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and CTRB2

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001020371.3 Gene:CTRB2 / 440387 HGNCID:2522 Length:263 Species:Homo sapiens


Alignment Length:277 Identity:88/277 - (31%)
Similarity:130/277 - (46%) Gaps:48/277 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 GRTFSGKQC-VPSV-PL------IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWG---CGGAL 224
            |.||.   | ||:: |:      ||.|.....|.:|...:|          || |.|   |||:|
Human    14 GTTFG---CGVPAIHPVLSGLSRIVNGEDAVPGSWPWQVSL----------QD-KTGFHFCGGSL 64

  Fly   225 VSELYVLTAAHCATSGSKPPDMVRLGARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKL 289
            :||.:|:|||||   |.:..|:|..|...........|.:||..:..:||:......:||.||||
Human    65 ISEDWVVTAAHC---GVRTSDVVVAGEFDQGSDEENIQVLKIAKVFKNPKFSILTVNNDITLLKL 126

  Fly   290 TRRVKFSEQVRPACLWQLP----ELQIPTVVA-AGWGRTEFLGAKS-NALRQVDLDVVPQMTCKQ 348
            ....:||:.|...|   ||    :....|:.| .|||:|::...|: :.|:|..|.::....||:
Human   127 ATPARFSQTVSAVC---LPSADDDFPAGTLCATTGWGKTKYNANKTPDKLQQAALPLLSNAECKK 188

  Fly   349 IYRKERRLPRGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNA 413
            .:      .|.|.:...|||  ..|..:|.||||||   |:.:.:....:|||.|:|....:...
Human   189 SW------GRRITDVMICAG--ASGVSSCMGDSGGP---LVCQKDGAWTLVGIVSWGSRTCSTTT 242

  Fly   414 PGVYTRLYSYLDWIEKI 430
            |.||.|:...:.|::||
Human   243 PAVYARVAKLIPWVQKI 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 79/252 (31%)
CTRB2NP_001020371.3 Tryp_SPc 34..259 CDD:238113 79/252 (31%)
Blue background indicates that the domain is not in the aligned region.

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