DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and Jon99Fi

DIOPT Version :9

Sequence 1:NP_001097766.1 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_651800.2 Gene:Jon99Fi / 43622 FlyBaseID:FBgn0039778 Length:267 Species:Drosophila melanogaster


Alignment Length:256 Identity:75/256 - (29%)
Similarity:117/256 - (45%) Gaps:48/256 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRLG 250
            |..|.|...|..|::..|.:: |:|:      |.|||:::...:|||||||....|..  .:..|
  Fly    38 ITNGYPAYEGKVPYIVGLLFS-GNGN------WWCGGSIIGNTWVLTAAHCTNGASGV--TINYG 93

  Fly   251 ARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQL-PELQIPT 314
            |...|:...|.. :.....|.|..|.|...::||:|:: |..|.|         |.| .::::|:
  Fly    94 ASLRNQPQYTHW-VGSGNFVQHHHYNSGNLHNDISLIR-TPHVDF---------WHLVNKVELPS 147

  Fly   315 ------------VVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCA 367
                        .||:|||.|.......:.|:.||:.::.|..|.:.:        .:.:...|.
  Fly   148 YNDRYQDYAGWWAVASGWGGTYDGSPLPDWLQAVDVQIMSQSDCSRTW--------SLHDNMICI 204

  Fly   368 GYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPN-APGVYTRLYSYLDWI 427
            . ..||:.||.||||||:  :..|.|   .:||:|||.......: ||.|::|:..|||||
  Fly   205 N-TNGGKSTCGGDSGGPL--VTHEGN---RLVGVTSFVSSAGCQSGAPAVFSRVTGYLDWI 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_001097766.1 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 75/256 (29%)
Tryp_SPc 186..427 CDD:214473 73/254 (29%)
Jon99FiNP_651800.2 Tryp_SPc 37..259 CDD:214473 73/254 (29%)
Tryp_SPc 38..262 CDD:238113 75/256 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437000
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
43.940

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