DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and Jon99Ciii

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_733330.1 Gene:Jon99Ciii / 43543 FlyBaseID:FBgn0003357 Length:265 Species:Drosophila melanogaster


Alignment Length:260 Identity:75/260 - (28%)
Similarity:119/260 - (45%) Gaps:56/260 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRLG 250
            |..|.|...|..|::..|.:: |:|:      |.|||:::...:|||||||....|..  .:..|
  Fly    36 ITNGYPAYEGKVPYIVGLLFS-GNGN------WWCGGSIIGNTWVLTAAHCTNGASGV--TINYG 91

  Fly   251 ARQLNETSATQQDIKILI----IVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQL-PEL 310
            |     :..||......:    |:.|..|.|...::||:|:: |..|.|         |.| .::
  Fly    92 A-----SIRTQPQYTHWVGSGDIIQHHHYNSGNLHNDISLIR-TPHVDF---------WSLVNKV 141

  Fly   311 QIPT------------VVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEG 363
            ::|:            .||:|||.|.......:.|:.||:.::.|..|.:.:        .:.:.
  Fly   142 ELPSYNDRYQDYAGWWAVASGWGGTYDGSPLPDWLQSVDVQIISQSDCSRTW--------SLHDN 198

  Fly   364 QFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPN-APGVYTRLYSYLDWI 427
            ..|.. ..||:.||.||||||:  :..:.|   .:||:||||......: ||.|::|:..|||||
  Fly   199 MICIN-TDGGKSTCGGDSGGPL--VTHDGN---RLVGVTSFGSAAGCQSGAPAVFSRVTGYLDWI 257

  Fly   428  427
              Fly   258  257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 75/260 (29%)
Jon99CiiiNP_733330.1 Tryp_SPc 36..260 CDD:238113 75/260 (29%)
Blue background indicates that the domain is not in the aligned region.

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