DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and CG7829

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_651732.1 Gene:CG7829 / 43522 FlyBaseID:FBgn0039703 Length:253 Species:Drosophila melanogaster


Alignment Length:258 Identity:73/258 - (28%)
Similarity:123/258 - (47%) Gaps:40/258 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 PLIVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWG---CGGALVSELYVLTAAHCATSGSKPPD 245
            |.||||.|......|::.::.            .:|   |||::::...:|||.||.........
  Fly    26 PRIVGGFPADIANIPYIVSIQ------------LYGIHHCGGSIINNHTILTAGHCLNGVPHRLL 78

  Fly   246 MVRLGARQLNETSATQQDIKILIIV---LHPKYRSSAYYHDIALLKLTRRVKFSEQVR--PACLW 305
            .|::|.     ||..::|.::..:.   :|..:......:||.:::||:.:..|.:|:  |....
  Fly    79 KVKVGG-----TSRYRKDGELFSVADLQVHENFNPKTMDYDIGIIRLTKNLTLSRKVKAIPINPE 138

  Fly   306 QLPELQIPTVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYL 370
            ::.|....|:  ||||.....|..|::||...:.:|.|..|:.:      |.:.:.:...|||||
  Fly   139 RVAEGTYATI--AGWGFKSMNGPPSDSLRYARVPIVNQTACRNL------LGKTVTDRMLCAGYL 195

  Fly   371 PGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWIEKIAFK 433
            .||.|.||.|||||:       :....:|||.|:|..||..:.||||:||.:...|::::..|
  Fly   196 KGGTDACQMDSGGPL-------SVREQLVGIVSWGVGCALADKPGVYSRLDALHPWLDQVLNK 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 71/251 (28%)
CG7829NP_651732.1 Tryp_SPc 27..244 CDD:214473 70/248 (28%)
Blue background indicates that the domain is not in the aligned region.

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