DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snk and CG31219

DIOPT Version :9

Sequence 1:NP_001097766.1 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001097837.1 Gene:CG31219 / 42344 FlyBaseID:FBgn0051219 Length:345 Species:Drosophila melanogaster


Alignment Length:369 Identity:102/369 - (27%)
Similarity:151/369 - (40%) Gaps:103/369 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 HGTRIDICTHRNNVPVICCPLADKHVLAQRISATKCQEYNAAARRLHLTDTGRTFSGKQCVP--- 181
            |.|..|.......|.:..||    ||.....|.|..:||:        .|....|..:.|.|   
  Fly    19 HSTNSDCYPGEKYVYLYECP----HVYTAGRSRTLMREYD--------MDAWLLFGQRICCPPPG 71

  Fly   182 -------------SVPLIVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTA 233
                         |...:|||:..|...:|.||.|.:.   .:...:|...|.|:|::..||||:
  Fly    72 NRLPSTEICGQSLSTYRMVGGSEARPNGYPWMAMLLYL---NTTTLEILPFCAGSLINNRYVLTS 133

  Fly   234 AHCATSGSKPPDM----VRLGARQL--------------NETSATQQDIKILIIVLHPKYRSSA- 279
            |||.  ...|.|:    ||||...:              |:.:....:||:..|::|..:.|.: 
  Fly   134 AHCV--NGIPRDLSLKSVRLGEHDITYDPAYNPDCRDQDNQCALPNLEIKLEKIIVHGLFSSISN 196

  Fly   280 --YYHDIALLKLTRRVKFSEQVRPACL-----WQLPELQIPTVVAAGWGRTE-----------FL 326
              ..:|||||:|...|::...:.|.|:     :...:|:|     ||||:|.           |:
  Fly   197 RNIEYDIALLRLKMPVRYRTGIMPICIPKHGFFAKSKLEI-----AGWGKTNEGQFSQVLMHGFI 256

  Fly   327 GAKS---NALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCA-GYLPGGRDTCQGDSGGPIHA 387
            ..:|   .|||...||:...:                   |.|| ||  .|.||||||||||:..
  Fly   257 RERSIAVCALRFPYLDLNQSL-------------------QICAGGY--DGVDTCQGDSGGPLMV 300

  Fly   388 LLPEYNCVAFVVGITSFG-KFCAAPNAPGVYTRLYSYLDWIEKI 430
            .:.  |...::.|||::| |.|.....||:|||..::|.||:.:
  Fly   301 TMD--NSSVYLAGITTYGSKNCGQIGIPGIYTRTSAFLPWIKAV 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_001097766.1 CLIP 93..139 CDD:197829 4/18 (22%)
Tryp_SPc 186..430 CDD:238113 85/285 (30%)
Tryp_SPc 186..427 CDD:214473 83/282 (29%)
CG31219NP_001097837.1 Tryp_SPc 88..339 CDD:214473 83/283 (29%)
Tryp_SPc 90..342 CDD:238113 85/284 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437407
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

Return to query results.
Submit another query.