DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and CG5255

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_650604.1 Gene:CG5255 / 42073 FlyBaseID:FBgn0038485 Length:273 Species:Drosophila melanogaster


Alignment Length:247 Identity:71/247 - (28%)
Similarity:107/247 - (43%) Gaps:32/247 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRLG 250
            ||||.....||.|:..:|   ||.||...    .||||::.|.:::|||||..........|..|
  Fly    30 IVGGEEAAAGLAPYQISL---QGIGSGAH----SCGGAIIDERWIITAAHCTRGRQATAFRVLTG 87

  Fly   251 ARQLNETSATQQDIKILI---IVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPELQI 312
            .:.|::..:     |...   ||.|..|....|.:|||||.|...:.|....:|..|..  |..:
  Fly    88 TQDLHQNGS-----KYYYPDRIVEHSNYAPRKYRNDIALLHLNESIVFDNATQPVELDH--EALV 145

  Fly   313 P--TVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYLPGGRD 375
            |  .::..|||.....|.....|:.::::.||...|:..:....|:..|.:    |. :...||.
  Fly   146 PGSRLLLTGWGTLSLGGDVPARLQSLEVNYVPFEQCRAAHDNSTRVDIGHV----CT-FNDKGRG 205

  Fly   376 TCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWI 427
            .|.||||||:     .:|  ..:|.:.::|..| |...|..:..:..|.|:|
  Fly   206 ACHGDSGGPL-----VHN--GKLVALVNWGLPC-AKGYPDAHASISYYHDFI 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 71/247 (29%)
CG5255NP_650604.1 Tryp_SPc 29..249 CDD:214473 70/245 (29%)
Blue background indicates that the domain is not in the aligned region.

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