DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and CG4053

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_650601.2 Gene:CG4053 / 42070 FlyBaseID:FBgn0038482 Length:265 Species:Drosophila melanogaster


Alignment Length:251 Identity:68/251 - (27%)
Similarity:107/251 - (42%) Gaps:37/251 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWG---CGGALVSELYVLTAAHCATSGSKPPDMV 247
            ||||.....|:.|:..::          |.| |.   |.|.:::|.::|||.|||...|.....:
  Fly    35 IVGGQEAEDGVAPYQVSI----------QTI-WKTHICSGVILNEQWILTAGHCALDFSIEDLRI 88

  Fly   248 RLGARQLNETSATQQDIKILIIVLHP-KYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPELQ 311
            .:|.....|...|....:.|:..|:. .|   .|.:||||:.:...:.|:::.:   :.:|...|
  Fly    89 IVGTNDRLEPGQTLFPDEALVHCLYDIPY---VYNNDIALIHVNESIIFNDRTQ---IVELSREQ 147

  Fly   312 IP---TVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYLPGG 373
            .|   ||...|||..|........|:.::|.::....|    |:......||..|..|. :...|
  Fly   148 PPAGSTVTLTGWGAPESSYPTVQYLQTLNLTIIAHEEC----RERWDFHDGIDIGHICT-FTREG 207

  Fly   374 RDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWIEK 429
            ...|.||||||   |:.|    ..:||:.::|:.|.. ..|.:|.....|.|||.:
  Fly   208 EGACSGDSGGP---LMWE----GKLVGLVNWGRACGV-GMPDMYANTVYYQDWIRR 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 68/251 (27%)
CG4053NP_650601.2 Tryp_SPc 35..256 CDD:238113 68/251 (27%)
Blue background indicates that the domain is not in the aligned region.

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