DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment snk and CG4053

DIOPT Version :9

Sequence 1:	NP_001097766.1	Gene:	snk / 41607	FlyBaseID:	FBgn0003450	Length:	435	Species:	Drosophila melanogaster
Sequence 2:	NP_650601.2	Gene:	CG4053 / 42070	FlyBaseID:	FBgn0038482	Length:	265	Species:	Drosophila melanogaster

Alignment Length:	251	Identity:	68/251 - (27%)
Similarity:	107/251 - (42%)	Gaps:	37/251 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWG---CGGALVSELYVLTAAHCATSGSKPPDMV 247
            ||||.....|:.|:..::          |.| |.   |.|.:::|.::|||.|||...|.....:
  Fly    35 IVGGQEAEDGVAPYQVSI----------QTI-WKTHICSGVILNEQWILTAGHCALDFSIEDLRI 88

  Fly   248 RLGARQLNETSATQQDIKILIIVLHP-KYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPELQ 311
            .:|.....|...|....:.|:..|:. .|   .|.:||||:.:...:.|:::.:   :.:|...|
  Fly    89 IVGTNDRLEPGQTLFPDEALVHCLYDIPY---VYNNDIALIHVNESIIFNDRTQ---IVELSREQ 147

  Fly   312 IP---TVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYLPGG 373
            .|   ||...|||..|........|:.::|.::....|    |:......||..|..|. :...|
  Fly   148 PPAGSTVTLTGWGAPESSYPTVQYLQTLNLTIIAHEEC----RERWDFHDGIDIGHICT-FTREG 207

  Fly   374 RDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWIEK 429
            ...|.||||||   |:.|    ..:||:.::|:.|.. ..|.:|.....|.|||.:
  Fly   208 EGACSGDSGGP---LMWE----GKLVGLVNWGRACGV-GMPDMYANTVYYQDWIRR 255

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
snk	NP_001097766.1	CLIP	93..139	CDD:197829
		Tryp_SPc	186..430	CDD:238113	68/251 (27%)
		Tryp_SPc	186..427	CDD:214473	66/247 (27%)
CG4053	NP_650601.2	Tryp_SPc	34..253	CDD:214473	66/247 (27%)
CG4053	NP_650601.2	Tryp_SPc	35..256	CDD:238113	68/251 (27%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24260
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	2.010