DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and CG17477

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_650598.1 Gene:CG17477 / 42067 FlyBaseID:FBgn0038479 Length:267 Species:Drosophila melanogaster


Alignment Length:249 Identity:68/249 - (27%)
Similarity:98/249 - (39%) Gaps:31/249 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRLG 250
            ||||.....|..|:..:|....||..        ||||::|:.:::||.||..........|..|
  Fly    27 IVGGQNAAEGDAPYQVSLQTLLGSHL--------CGGAIISDRWIITAGHCVKGYPTSRLQVATG 83

  Fly   251 ARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPELQIP-- 313
            ..:..|..|.....   .|.||..|.|..|.:||.||.|...:.|:...:..   :||....|  
  Fly    84 TIRYAEPGAVYYPD---AIYLHCNYDSPKYQNDIGLLHLNESITFNALTQAV---ELPTSPFPRG 142

  Fly   314 --TVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYLPGGRDT 376
              .:|..|||.....|:..:.|::|....:....|:.:......|..|  ....|| |.......
  Fly   143 ASELVFTGWGSQSAAGSLPSQLQRVQQQHLNSPACESMMSAYEDLELG--PCHICA-YRQANIGA 204

  Fly   377 CQGDSGGP-IHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWIEK 429
            |.|||||| :|.        ..:|||.:|...| |...|.::..:..|.||:.:
  Fly   205 CHGDSGGPLVHQ--------GTLVGILNFFVPC-AQGVPDIFMNIMYYRDWMRQ 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 68/249 (27%)
CG17477NP_650598.1 Tryp_SPc 27..250 CDD:238113 68/249 (27%)
Blue background indicates that the domain is not in the aligned region.

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