DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and CG13318

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_649831.1 Gene:CG13318 / 41048 FlyBaseID:FBgn0037627 Length:405 Species:Drosophila melanogaster


Alignment Length:275 Identity:87/275 - (31%)
Similarity:121/275 - (44%) Gaps:48/275 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 QCVPSVPLIVGGT-----PTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCA 237
            ||....|...|.|     ....|.:|..|||..|       .|:..| ||||::..:||||||..
  Fly   150 QCGRRFPPPPGSTTAAPGQASFGAYPWQAALLTT-------ADVYLG-GGALITAQHVLTAAHKV 206

  Fly   238 TSGSKPPDMVRLGARQLNETS--ATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQ-- 298
            .:.......||||......||  ...||:.|..:.::|.:..:...:|:|:|||:..|..:.:  
  Fly   207 YNLGLTYFKVRLGEWDAASTSEPIPAQDVYISNVYVNPSFNPNNLQNDVAILKLSTPVSLTSKST 271

  Fly   299 VRPACLWQLPELQIPTVV-------AAGWGRTEF--LGAKSNALRQVDLDVVPQMTCKQIYRKER 354
            |...||        ||..       .||||:.:|  .||.....||||:.::|...|:...:..|
  Fly   272 VGTVCL--------PTTSFVGQRCWVAGWGKNDFGATGAYQAIERQVDVPLIPNANCQAALQATR 328

  Fly   355 ------RLPRGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNA 413
                  ..|...|    |||. ..|:|.|.||.|.|   |:...|.|.:|||:.::|..||....
  Fly   329 LGSSFVLSPTSFI----CAGG-EAGKDACTGDGGSP---LVCTSNGVWYVVGLVAWGIGCAQAGV 385

  Fly   414 PGVYTRLYSYLDWIE 428
            ||||..:.:||.||:
  Fly   386 PGVYVNVGTYLPWIQ 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 84/267 (31%)
CG13318NP_649831.1 CLIP_1 <91..145 CDD:465709
Tryp_SPc 169..402 CDD:238113 82/256 (32%)
Blue background indicates that the domain is not in the aligned region.

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