DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and MP1

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001303421.1 Gene:MP1 / 40541 FlyBaseID:FBgn0027930 Length:400 Species:Drosophila melanogaster


Alignment Length:410 Identity:127/410 - (30%)
Similarity:171/410 - (41%) Gaps:115/410 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 FCRRSFDGRSGYCILAYQCLHV--------IREYRVHGTRIDICTHRN-----------NVPVIC 137
            :||.. |..||.||...:|.::        :.|......:...|.:||           ||. ||
  Fly    28 YCRTP-DENSGTCINLRECGYLFELLQSEEVTEQDRRFLQASQCGYRNGQVLEKHFCFTNVQ-IC 90

  Fly   138 C---------PLADKHVLAQRISATKCQEYNAAARRLHLTDTGRTFSGKQCVPSVP--------L 185
            |         |....|  .|....||              .|.|  ||.:.:|..|        .
  Fly    91 CANSRMRNQQPQWGNH--PQPTQTTK--------------PTKR--SGTKLLPMAPNCGENFGDR 137

  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATS----------- 239
            :|||..|....||.||.:.:|:....|...    |||:|::..||||||||.::           
  Fly   138 VVGGNETTKREFPWMALIEYTKPGNVKGHH----CGGSLINHRYVLTAAHCVSAIPSDWELTGVR 198

  Fly   240 -----GSKPPDMV--RLGARQLNETSATQQDIKILIIVLHPKY--RSSAYYHDIALLKLTRRVKF 295
                 .|..||..  :.|.|..||...   |..:...:.||:|  .|....:|||||:|...|::
  Fly   199 LGEWDASTNPDCTVGKNGRRDCNEPYV---DYPVEERIPHPQYPGNSRDQLNDIALLRLRDEVQY 260

  Fly   296 SEQVRPACLWQLPELQIPT-------------VVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCK 347
            |:.:.|.||        ||             ||.||||||| ....||...:.:||.||...|.
  Fly   261 SDFILPVCL--------PTLASQHNNIFLGRKVVVAGWGRTE-TNFTSNIKLKAELDTVPTSECN 316

  Fly   348 QIYRKERRLPRGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEY---NCVAFVVGITSFGKF-C 408
            |.|..:||.   :...|.|||.:. |.|:|:||||||:  ||.:|   |...::.|:.|:|.. |
  Fly   317 QRYATQRRT---VTTKQMCAGGVE-GVDSCRGDSGGPL--LLEDYSNGNSNYYIAGVVSYGPTPC 375

  Fly   409 AAPNAPGVYTRLYSYLDWIE 428
            .....||||||:.:||:|||
  Fly   376 GLKGWPGVYTRVEAYLNWIE 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829 17/73 (23%)
Tryp_SPc 186..430 CDD:238113 99/280 (35%)
MP1NP_001303421.1 CLIP 29..91 CDD:463440 15/63 (24%)
Tryp_SPc 138..397 CDD:238113 99/280 (35%)

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