DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and MP1

DIOPT Version :9

Sequence 1:NP_001097766.1 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001303421.1 Gene:MP1 / 40541 FlyBaseID:FBgn0027930 Length:400 Species:Drosophila melanogaster


Alignment Length:410 Identity:127/410 - (30%)
Similarity:171/410 - (41%) Gaps:115/410 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 FCRRSFDGRSGYCILAYQCLHV--------IREYRVHGTRIDICTHRN-----------NVPVIC 137
            :||.. |..||.||...:|.::        :.|......:...|.:||           ||. ||
  Fly    28 YCRTP-DENSGTCINLRECGYLFELLQSEEVTEQDRRFLQASQCGYRNGQVLEKHFCFTNVQ-IC 90

  Fly   138 C---------PLADKHVLAQRISATKCQEYNAAARRLHLTDTGRTFSGKQCVPSVP--------L 185
            |         |....|  .|....||              .|.|  ||.:.:|..|        .
  Fly    91 CANSRMRNQQPQWGNH--PQPTQTTK--------------PTKR--SGTKLLPMAPNCGENFGDR 137

  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATS----------- 239
            :|||..|....||.||.:.:|:....|...    |||:|::..||||||||.::           
  Fly   138 VVGGNETTKREFPWMALIEYTKPGNVKGHH----CGGSLINHRYVLTAAHCVSAIPSDWELTGVR 198

  Fly   240 -----GSKPPDMV--RLGARQLNETSATQQDIKILIIVLHPKY--RSSAYYHDIALLKLTRRVKF 295
                 .|..||..  :.|.|..||...   |..:...:.||:|  .|....:|||||:|...|::
  Fly   199 LGEWDASTNPDCTVGKNGRRDCNEPYV---DYPVEERIPHPQYPGNSRDQLNDIALLRLRDEVQY 260

  Fly   296 SEQVRPACLWQLPELQIPT-------------VVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCK 347
            |:.:.|.||        ||             ||.||||||| ....||...:.:||.||...|.
  Fly   261 SDFILPVCL--------PTLASQHNNIFLGRKVVVAGWGRTE-TNFTSNIKLKAELDTVPTSECN 316

  Fly   348 QIYRKERRLPRGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEY---NCVAFVVGITSFGKF-C 408
            |.|..:||.   :...|.|||.:. |.|:|:||||||:  ||.:|   |...::.|:.|:|.. |
  Fly   317 QRYATQRRT---VTTKQMCAGGVE-GVDSCRGDSGGPL--LLEDYSNGNSNYYIAGVVSYGPTPC 375

  Fly   409 AAPNAPGVYTRLYSYLDWIE 428
            .....||||||:.:||:|||
  Fly   376 GLKGWPGVYTRVEAYLNWIE 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_001097766.1 CLIP 93..139 CDD:197829 17/73 (23%)
Tryp_SPc 186..430 CDD:238113 99/280 (35%)
Tryp_SPc 186..427 CDD:214473 96/277 (35%)
MP1NP_001303421.1 CLIP 29..91 CDD:288855 15/63 (24%)
Tryp_SPc 137..394 CDD:214473 96/278 (35%)
Tryp_SPc 138..397 CDD:238113 99/280 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437435
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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