DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and CG14088

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_649100.2 Gene:CG14088 / 40098 FlyBaseID:FBgn0036858 Length:289 Species:Drosophila melanogaster


Alignment Length:293 Identity:65/293 - (22%)
Similarity:104/293 - (35%) Gaps:74/293 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 LHLTDTGRT-FSGKQCVPSVPLIVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCG-----GA 223
            :.|:.||.. |.|..|          ...|.||.|.:.. .||.        |....|     |.
  Fly    16 IFLSGTGSAQFLGNIC----------GERRDGLSPDIVG-PWTA--------ILHHFGRIVGVGT 61

  Fly   224 LVSELYVLTAAHCATS----GSKPPDMVRLGARQLNETSATQQDIKILIIVLHPKYRSSAYYHDI 284
            |:.|.::||..||..|    .::..:..|:|       |...:|..:.....:..:......:::
  Fly    62 LIHERFILTDVHCGDSIGVIRARLGEYGRIG-------SELAEDHIVAAFFSNANFNPETQANNM 119

  Fly   285 ALLKLTRRVKFSEQVRPACLWQLPELQIPTVV-------AAGWGRTEFLGAKSNALRQVDLDVVP 342
            .|:||.|.|.:.|.:.|.|:  |.:.::.|..       ...|..::    ||..||...:..:|
  Fly   120 GLMKLLRTVVYKEHIIPVCI--LMDSRMQTFADELDYFNGTTWKNSD----KSPMLRSKTVIRMP 178

  Fly   343 QMTCKQIYRKERRLPRGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCV----AFVVGI-T 402
            |...|            :..||||||:  ...|:|...||.   ||..|.:.:    ..:.|| .
  Fly   179 QACGK------------LDHGQFCAGH--KDLDSCDEPSGA---ALTREIDYIGPNRTVLFGIAN 226

  Fly   403 SFGKFCAAPNAPGVYTRLYSYLDWIEKIAFKQH 435
            |....|:...   .||.:.....||..:.:..:
  Fly   227 SVEVKCSNSR---TYTDVVQLHQWISMVIYSSN 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 59/264 (22%)
CG14088NP_649100.2 Tryp_SPc 42..248 CDD:473915 53/247 (21%)
Blue background indicates that the domain is not in the aligned region.

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