DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and CG6865

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001246825.1 Gene:CG6865 / 40050 FlyBaseID:FBgn0036817 Length:285 Species:Drosophila melanogaster


Alignment Length:305 Identity:95/305 - (31%)
Similarity:146/305 - (47%) Gaps:59/305 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 ISATKCQEYNAAARRLHLTDTGRTFSGKQCVPSVPLIVGGTPTRHGLFPHMAALGWTQGSGSKDQ 214
            :|..||.:...|            ||.:.|....|.||||:.......|:|.:|           
  Fly    11 LSLVKCAQSQIA------------FSNQPCSVRNPKIVGGSEAERNEMPYMVSL----------- 52

  Fly   215 DIKWG---CGGALVSELYVLTAAHCATSG----SKPPDMVR-LGARQLNE--------TSATQQD 263
             ::.|   |||.::||.::|||.||..:|    .||..:.. :|...:.|        ..|.:.|
  Fly    53 -MRRGGHFCGGTIISERWILTAGHCICNGLQQFMKPAQIQGVVGLHSIREYLNGIGNGPDALRVD 116

  Fly   264 IKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACL-----WQLPELQIPTVVAAGWGRT 323
            .|  .||.||:|..:...||||||:|.:.::||..::|:|:     .:..|.:..||  :|||.|
  Fly   117 FK--NIVPHPQYDCNDVKHDIALLELVQPIRFSSHIQPSCVGSEEGHRSLEQEYGTV--SGWGWT 177

  Fly   324 EFLGA---KSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYLPGGRDTCQGDSGGPI 385
            ....|   :|:.||:..:.:.....|::.||...: ...|.|.|.||||..|..|:|..|||||:
  Fly   178 HENQAENDRSDVLRKATVKIWNNEACERSYRSLGK-SNTIGETQLCAGYENGQIDSCWADSGGPL 241

  Fly   386 HALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWIEKI 430
              :..|::    :||:.|.|..||.|..||:|||:..|:.|::|:
  Fly   242 --MSKEHH----LVGVVSTGIGCARPGLPGIYTRVSKYVSWMQKV 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 86/267 (32%)
CG6865NP_001246825.1 Tryp_SPc 34..276 CDD:214473 85/264 (32%)
Blue background indicates that the domain is not in the aligned region.

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