DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and CG7542

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_648995.3 Gene:CG7542 / 39960 FlyBaseID:FBgn0036738 Length:270 Species:Drosophila melanogaster


Alignment Length:255 Identity:82/255 - (32%)
Similarity:128/255 - (50%) Gaps:30/255 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 PLIVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVR 248
            |.|..|.|...|.||:.|.|..:.|:.|     .| |||.|:|..:::|||||.......  .|.
  Fly    25 PYITNGEPAEVGQFPYQAGLNVSFGNWS-----TW-CGGTLISHYWIITAAHCMDGAESV--TVY 81

  Fly   249 LGARQLNETSATQQDIKILI----IVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPE 309
            |||..:.:.|...|: :|::    |::|..|.:|...:||:|::|...|.|::::|.|.|.:...
  Fly    82 LGAINIGDESEEGQE-RIMVEKSGIIVHSNYMASTVVNDISLIRLPAFVGFTDRIRAASLPRRLN 145

  Fly   310 LQIPT-----VVAAGWGR-TEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAG 368
            .|.||     ..|:|||| ::...:.|..||.|::.::|...|:..:       .|.:..:....
  Fly   146 GQFPTYESIRAFASGWGRESDASDSVSPVLRYVEMPIMPHSLCRMYW-------SGAVSEKMICM 203

  Fly   369 YLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAP-NAPGVYTRLYSYLDWI 427
            ....|:.||.||||||   |:.:....::::|.||||...... ..|.|:||:.||||||
  Fly   204 STTSGKSTCHGDSGGP---LVYKQGNSSYLIGSTSFGTSMGCQVGFPAVFTRISSYLDWI 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 81/253 (32%)
CG7542NP_648995.3 Tryp_SPc 27..263 CDD:238113 81/253 (32%)
Blue background indicates that the domain is not in the aligned region.

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